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Name : Namu_4926 (Namu_4926) Accession : YP_003204189.1 Strain : Nakamurella multipartita DSM 44233 Genome accession: NC_013235 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 5500032 - 5501768 bp Length : 1737 bp Strand : - Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: lch:Lcho_3323 alpha amylase catalytic region DNA sequence : ATGGCCGTCGTGAGTCGTGCATCCGGTCCCGATTGGTGGAAACGGGCCGTCGTCTACCAGATCTATCCGCGCAGTTTCGC CGATTCCGACGGGGACGGAATCGGCGATCTGCGGGGGATCATCTCCCGGCTGGACCATCTGGCCCGGCTGGGCGTGGACG TTATCTGGCTCTCGCCGGTCTATCCCTCGCCGCAGGACGACAACGGTTACGACATCAGCGACTATCAGGGAATTGAGCCG GTCTTCGGCACCCTGTCCGATTTCGACGAGTTGCTGGCCGGGGTCCACGACCGCGGCATGCGACTGGTGATGGACTTGGT CGTCAATCACACCTCCGACGAGCACCCGTGGTTCGTCGAATCACGGGCTGACCCGGCCGGTCCCCGCCGGGACTGGTACT GGTGGCGCGGCGCTCGTCCGGGGATGGCGCCCGGTGCGCCCGGGGCCGAGCCGACCAACTGGGCCTCGTTCTTCAGCGGT CCGGCCTGGGAATTCGACGAGGCCAGCGGCGAGTACTACCTGCATCTTTTCTCCCGCAAACAGCCCGACCTGAATTGGGA GAATCCGGACGTCCGCCAGGCCGTCTACGCGATGATGCGTTGGTGGCTCGACCGCGGGGTCGACGGTTTCCGCATGGACG TCATCAACATGATTTCCAAGCAGCTGCCGCTGGCCGACGGGCCGGTGACGCACGGCGTTCTCGGCGACGGCTCGGCCCTG TTCCAATGCGGACCGCGTATTCACGAGTTCCTGCAGGAAATGCACGAGCAGGTATTCGCCGGCCGGCCCGAACACGTGCT GACCGTCGGCGAGATGCCCGGGGTGACGGTCGAGGAGGCCGTGCTGTTCACCGATCCGCAGCGGCGCGAGGTCGACATGG TCTTCCAGTTCGAACATGTCAGCCTCGACCAGGGTCCGGGCGGGAAATGGGATATCCGGCCCTTGCGCCTGCTGGACCTG AAGGCCAGCCTGGGTCGCTGGCAGGCGGGATTGGCCGAGCGCGGCTGGAACAGCCTGTACTGGGACAACCACGACCAGCC CCGGGCGGTGTCGCGATTCGGCGACGACGGCCGGTACCGGACCGAATCGGCGAAAATGTTGGCCACGGTGCTGCACCTGC ACCGCGGGACGCCCTACATCTACCAGGGCGAAGAACTGGGCATGACGAACGTGCCGTTCGCCGGCCCGGAGGATTTCCGG GACATCGAATCGGTCAACTACTACGCAAGCGCGGTGGCCGGTGGCGCGGATCCCGCGGCGGTGCTGGCGGCCCTGCGGCC GCTGAGCCGGGACAACGCCCGCACCCCGATGCACTGGGACGATTCGCCGGCCGCCGGATTCAGCACCGGTGAGCCGTGGA TCGCCGTCAATCCCAATTACCCGCAGATCAACGCCCGCGCCCAGGTCGACGATCCGGATTCGGTGTTCTCCCACTACCGG GCGGTCATCGCGCTGCGGCACGCCGAACCCGCCGTCGTCGACGGCGATTTCACCATGCTGCTGCCGGACGACCCGACCGT GTACGCGTTCACCCGGTCGTTGGCCGGCACGACGCTGCTCGTGGTGGCGAATTTCTCCGGCGACCCGGTGCCCGCGCCGG TGCCCGAGGCCGCCCAGTGGGCCGCCGCCGAATTCGTGCTGGGCAATTACCCGGCGCCCGATCCCGCGCCCGATCCGGCA CCGCCGACCCTGCTGCTCGCGCCGTGGGAGGCCCGGGTGTACCGGCGCGTCGGGTGA Protein sequence : MAVVSRASGPDWWKRAVVYQIYPRSFADSDGDGIGDLRGIISRLDHLARLGVDVIWLSPVYPSPQDDNGYDISDYQGIEP VFGTLSDFDELLAGVHDRGMRLVMDLVVNHTSDEHPWFVESRADPAGPRRDWYWWRGARPGMAPGAPGAEPTNWASFFSG PAWEFDEASGEYYLHLFSRKQPDLNWENPDVRQAVYAMMRWWLDRGVDGFRMDVINMISKQLPLADGPVTHGVLGDGSAL FQCGPRIHEFLQEMHEQVFAGRPEHVLTVGEMPGVTVEEAVLFTDPQRREVDMVFQFEHVSLDQGPGGKWDIRPLRLLDL KASLGRWQAGLAERGWNSLYWDNHDQPRAVSRFGDDGRYRTESAKMLATVLHLHRGTPYIYQGEELGMTNVPFAGPEDFR DIESVNYYASAVAGGADPAAVLAALRPLSRDNARTPMHWDDSPAAGFSTGEPWIAVNPNYPQINARAQVDDPDSVFSHYR AVIALRHAEPAVVDGDFTMLLPDDPTVYAFTRSLAGTTLLVVANFSGDPVPAPVPEAAQWAAAEFVLGNYPAPDPAPDPA PPTLLLAPWEARVYRRVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-120 | 52 |
