Gene Information

Name : Namu_4785 (Namu_4785)
Accession : YP_003204050.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 5321233 - 5323392 bp
Length : 2160 bp
Strand : +
Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo

DNA sequence :
TTGACGACGGCGCATGTGCCCGATGACTGGTCGGAGTTGGACCGGCGGGCGGTGGACACCGCGCGGGTGTTGGCCGCGGA
CGCGGTGCAGAAGGTCGGCAACGGGCATCCCGGCACGGCGATGTCGTTGGCGCCGACCGCGTATTCGTTGTTCCAGCGGG
TCATGCGGCACGATCCCGCGGACCCGCACTGGGTGGGCCGGGACCGGTTCGTGCTGTCCTGCGGTCATTCCTCGTTGACC
CTGTACGTGCAGCTGTACCTGGGCGGGTTCGGCCTGGAACTGGCCGACCTGGAAGCGTTGCGGACCTGGGGATCGCTGAC
CCCGGGGCACCCGGAGTACCACCACACCAAGGGCGTGGAGATCACCACCGGCCCGCTGGGCCAGGGCCTGGCGTCCGCGG
TCGGGATGGCCATGGCGGCCCGCCGGGAACGGGGCCTGTTCGATCCGGACGCCCCGGCCGGGCAGTCCCCGTTCGACCAT
TTCATCTACGTGCTGGCCTCCGACGGTGACATCGAGGAGGGCGTCACGTCCGAGGCGTCCTCGATCGCCGGCCGGCAGCA
GCTGGGCAACCTGGTCGTGATCTACGACCACAACGACATCAGCATCGAGGACGACGTCAACATCGCGCTGAGCGAGGACG
TCGCCGCCCGCTACGAGGCGTACGGCTGGCATGTGCAGCAGGTCCAGGGCGGGGAGAACGTCACCGGCATCCTCGAGGCG
ATCGAGAACGCCAAGGCGGTGACCGACCGGCCCTCGTTCATCGAGCTGCGCACGATCATCGCCTACCCGGCGCCGACCCT
GATGAACACCGGCAAGGCCCACGGCTCCGCGCTGGGCGCACCCGAGGTCGCCGCGGTCAAAAAGATCCTCGGGTTCGACC
CCGACCGCAGCTTCCAGGTCGAACCCGAGGTGATCGCGCACACCCGGGGGCTGCTCGATCGGGGCGCCGCCGCCCGAGCG
GACTGGCAGACCGGGTTCGACGCCTGGACGGCCGCCAACCCGCAGCGCAAGGCGTTGTTCGACCGGTTGACCGCCCGCGA
CCTGCCCGACGGATGGACCAAGGTGCTGCCGTCGTGGGACGTCGACCCCAAGGGCATCGCGACCCGCGCCGCGTCCGGCA
AGGTCCTGAGCGCGTTGGGCCCGGTGCTACCCGAACTGTGGGGCGGCTCGGCCGACCTGGCCGAATCCAACAACACCACC
ATCGAGGGCGCCGACAGCTTCGGCCCGGTCGATGCCGCGACCAAACACTGGAACGCCCAGCCCTACGGGCGGACCCTGCA
CTTCGGGATCCGGGAACACGCCATGGGCGCGATCCTGTCCGGGATCGTGATGCACGGCCCGACCCGCCCCTACGGCGGCA
CCTTCCTGCAATTCAGTGATTACATGCGCGGCGCGGTCCGCCTGGCCGCGCTCATGGGCGCCCCCGCGATCTACGTCTGG
ACCCACGACTCGATCGGCCTGGGCGAGGACGGCCCCACCCACCAGCCGGTGGAACACCTGGCCGCGCTGCGCGCGATCCC
CGGCCTGAGCGTGGTCCGCCCGGCCGACGCCAACGAAACCGCCTACGCCTGGCAGGCCGTGCTGGACCGCCAACACGACT
GGTTCACCGGCCCGGTCGGGCTGTGCCTGACCCGCCAGGCCGTGCCCGTCCTGGCCGGGACCACCGCCGACGGCGTCGCC
AAGGGCGCCTACATCCTGGCCGACTGGGACCCCACCGCCGAACGCAAGGTCATCCTGATGGGCTCGGGCAGCGAGGTCCA
ACTCGCCGTCGCCGCCCGCGACGCCCTGGCCGCCGACGGCATCAGCGCCCGCGTGGTGTCCGTGCCCTGCCTGGACTGGT
TCGAACAACAAGACGCCGCCTACATCGAGTCCGTGCTGCCCACCGCGGTCACCGCCCGGGTCAGCGTGGAAGCCGCCATC
GCCCAACCCTGGTGGCGCTGGCTCGGCGCCCACGGCACACCCGTCTCCCTCGAGCACTACGGCGCCTCCGCCGACGCCAC
CACCCTGTTCACCAAATTCGGCATCACCAGCCAAGCCGTCGCCGACGCCGCCCGCGCCAGCCTGGAGGCGGCCCGGACCA
ATCAGGGACCCAGCAGCACCCCGAACTCCGCGGCGCTGGATCATGCCGGGGCGGACGACCCGGCTCCCACCAGCAAGTAG

Protein sequence :
MTTAHVPDDWSELDRRAVDTARVLAADAVQKVGNGHPGTAMSLAPTAYSLFQRVMRHDPADPHWVGRDRFVLSCGHSSLT
LYVQLYLGGFGLELADLEALRTWGSLTPGHPEYHHTKGVEITTGPLGQGLASAVGMAMAARRERGLFDPDAPAGQSPFDH
FIYVLASDGDIEEGVTSEASSIAGRQQLGNLVVIYDHNDISIEDDVNIALSEDVAARYEAYGWHVQQVQGGENVTGILEA
IENAKAVTDRPSFIELRTIIAYPAPTLMNTGKAHGSALGAPEVAAVKKILGFDPDRSFQVEPEVIAHTRGLLDRGAAARA
DWQTGFDAWTAANPQRKALFDRLTARDLPDGWTKVLPSWDVDPKGIATRAASGKVLSALGPVLPELWGGSADLAESNNTT
IEGADSFGPVDAATKHWNAQPYGRTLHFGIREHAMGAILSGIVMHGPTRPYGGTFLQFSDYMRGAVRLAALMGAPAIYVW
THDSIGLGEDGPTHQPVEHLAALRAIPGLSVVRPADANETAYAWQAVLDRQHDWFTGPVGLCLTRQAVPVLAGTTADGVA
KGAYILADWDPTAERKVILMGSGSEVQLAVAARDALAADGISARVVSVPCLDWFEQQDAAYIESVLPTAVTARVSVEAAI
AQPWWRWLGAHGTPVSLEHYGASADATTLFTKFGITSQAVADAARASLEAARTNQGPSSTPNSAALDHAGADDPAPTSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 7e-113 43
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 3e-107 42