Gene Information

Name : Namu_4475 (Namu_4475)
Accession : YP_003203748.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Unknown
Product : Integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4973404 - 4974195 bp
Length : 792 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: azc:AZC_1931 transposase

DNA sequence :
GTGAGCGAGCGGTTCGCGTGTCGGGTGACCGGGCAGCACCGAGCCACCCAACGCCACCAACCGCCGGCGCAGACGCCGGC
CGACCCCGACGCCACGCTCCGCAACTGGCTGCGGGCGTACGCGGCCAAGCATCCGCGGTGGGGTCACCGCCGCGCCTACC
ACGACGCACGCGCCGACGGTTGGGCGGTGAATCACAAGAAGGTGCAACGGCTTTGGCGGGAGGAAGGACTGCGGGTGCCG
CAGCACCGCCGCCGCAAACGCGTCGGCACCAGCACCACACAGGAGCGGCCGACAGCAGACGCCCCGAACATCGTCTGGGC
CGTGGACTTCCAGTTCGACGCCACCACCGACGGGCGGCCGGTCAAGATCGTGTCGCTCGTTGACGAACACACCAGGGAGA
CGTTCGGCGGTCTCGTCGACCGCTCGATCACCGCCGATCGGCTCATCGATGAACTCGACAGGGTCGCCGCGGTTCGCGGC
TACCCGGCGGTGCTTCGCTGCGACAACGGCCCCGAACTGGCGTGTGCGGCGATGGCCGACTGGGCCGGGCAACGCGTCGG
TCTGTCGTTCATTCCGCCCGGTGAACCGTGGCGCAACGGGTACATCGAATCGTTCAACGGCCGGCTCCGCGACGAATGCC
TGAACATCAATCAGTTCTGGTCGCTCACCCACGCCCGAGTCGTCATCGACGACTGGAAGCTCGAGTACAACCAGCACCGC
CGGCACTCAGCGCTGGGCTACCAGACACCGGCTGGATACGCTGCCAGCTGCACCCACCAATCCACCAACTGA

Protein sequence :
MSERFACRVTGQHRATQRHQPPAQTPADPDATLRNWLRAYAAKHPRWGHRRAYHDARADGWAVNHKKVQRLWREEGLRVP
QHRRRKRVGTSTTQERPTADAPNIVWAVDFQFDATTDGRPVKIVSLVDEHTRETFGGLVDRSITADRLIDELDRVAAVRG
YPAVLRCDNGPELACAAMADWAGQRVGLSFIPPGEPWRNGYIESFNGRLRDECLNINQFWSLTHARVVIDDWKLEYNQHR
RHSALGYQTPAGYAASCTHQSTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 8e-37 49
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-39 45
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 2e-26 43