Gene Information

Name : Namu_3903 (Namu_3903)
Accession : YP_003203185.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 4304735 - 4304929 bp
Length : 195 bp
Strand : -
Note : PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pfl:PFL_4031 DNA-binding protein

DNA sequence :
GTGAAGAACTCCCTGCGGTCGTTGCGGGAGGCAAAGGGCTGGACGCAGGGCGCACTGGCCGATCGGCTGGAGGTCTCCCG
GCAGACCGTCAACGCGCTGGAGACCGGCAAGTACGACCCCAGCTTGCCGTTGGCCTTCCGGATCGCCCGGCTGTTCGACC
GGGCGATCGAGGAGGTCTTCGATCCCGACGGCTGA

Protein sequence :
MKNSLRSLREAKGWTQGALADRLEVSRQTVNALETGKYDPSLPLAFRIARLFDRAIEEVFDPDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-11 53
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 5e-08 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-08 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Namu_3903 YP_003203185.1 XRE family transcriptional regulator VFG2175 Protein 1e-08 50
Namu_3903 YP_003203185.1 XRE family transcriptional regulator VFG2168 Protein 1e-08 50