Gene Information

Name : Namu_3626 (Namu_3626)
Accession : YP_003202928.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3980412 - 3981113 bp
Length : 702 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bra:BRADO0992 ABC transporter ATP- binding protein

DNA sequence : 
ATGACTCTCATCCTTGACACCGTCCATCTCACCTACCCCGATGGGGAACAGCGGCTGACCGCGCTGGACCGGGTGAGCCT
GCAGGTCGGCCCCGGCGAAATATTTGCCGTCACGGGACCATCCGGCTCCGGCAAGTCCAGCCTCCTCGCGGTGGCCGGCG
CGTTGATCGCCCCGGACTCCGGGACCGTCAGCATCGACGGCATCCTGCTGGCCGGCCTGGACCGGGCAGCTCTGGATCGG
GTCCGCCGGGAACGCATCGGTTTCGTCTTCCAGCAGGCCAACCTGCTGCCGTCGCTGACCGTCCTTGATCAGCTGCTGCT
GGTCAGCCACCTCACGCGCAGTCCCCGCGAGGCAGCCTTGGACCGGGCCCGGTGGTTGCTCGATCGGGTCGGCCTGACCA
CCAAGTCCGGAAAACGGCCGCACCAACTGTCCGGCGGTGAGCGGCAGCGCGTCGGCATCGCCCGGGCGTTGATGGGGGAG
CCCGCCTTGTTGCTGGTGGACGAACCGACCTCCGCGCTGGACCACGACCGCGGCCACGCCGTGATGCAGATGCTGCGCGA
GGTGACCGTCGAACAGCGCACCGCCACCATCGTGGTTACCCACGACCTGCAATACCTGCCGCTGGCCGACCGGACAGCCG
CGATGACCGACGGCCGCCTCAGTCTCGCTCCCACCCGCCCCGAGTTCAGCGCCGCCCACTAG

Protein sequence : 
MTLILDTVHLTYPDGEQRLTALDRVSLQVGPGEIFAVTGPSGSGKSSLLAVAGALIAPDSGTVSIDGILLAGLDRAALDR
VRRERIGFVFQQANLLPSLTVLDQLLLVSHLTRSPREAALDRARWLLDRVGLTTKSGKRPHQLSGGERQRVGIARALMGE
PALLLVDEPTSALDHDRGHAVMQMLREVTVEQRTATIVVTHDLQYLPLADRTAAMTDGRLSLAPTRPEFSAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-29 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Namu_3626 YP_003202928.1 ABC transporter NC_008702.1.4606598. Protein 2e-24 43
Namu_3626 YP_003202928.1 ABC transporter NC_012469.1.7686878. Protein 4e-28 42