Gene Information

Name : Namu_3578 (Namu_3578)
Accession : YP_003202888.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Unknown
Product : TniB family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3929614 - 3930540 bp
Length : 927 bp
Strand : -
Note : PFAM: TniB family protein; KEGG: xcv:XCV2342 transposition protein TniB

DNA sequence :
ATGGGAAGCAGCACGGGTAGCGGAGTCGAGGGCGATCCGGATCTTGAGCACCTGCGTCCGGAGATCCGGCCGATAGCCTG
CCTTCCGGGCGAGGAACGGCTCCGGTTCGTGCGCGCGGACCGGTGGATCGGCTACAGCCGGGCGGCGGCGTCGTTGGAGC
GGCTGGAGGAGTTGTACGGCTGGCCGGGCCGGCAGCGGATGCCGAACATGCTGCTGATCGGGCCGACGAACAACGGCAAG
TCGATGATCGTCGAGAAGTTCCGACGCGGCCACCCGCCGATCTCCCACCCGGACAGGGAGGAGATCCCGGTGCTGGTCGT
GCAAATGCCGTCCGAGCCCTCGGTGACCCGGTTCTATGTCGCGGTGCTGGCCGCGATGGGTGCGCCGTTGCGGCCGCGGC
AACGGCTGGCCGAACTCGAACAGGCCACGCTGACGCTGCTGCGGGCGGTCGGGGTGCGGATGCTGGTGATCGACGAGCTG
CACAACGTGCTGGCCGGCAGCAGCGATCGTCGACGCGAGTTCCTTAACCTGATCCGGTTCCTGGGCAACGAGCTGCGGAT
ACCACTGGTCGGCGTGGGCACCCGCGAGGCTTATCTGGCGATCCGCTCCGACGATCAACTCGAGAACCGCTTCCAGCCGT
TCCCGCTGCCGCGGTGGGAACCCGACCAGGAATCGTGTTCGCTGCTGGCCAGCTTCGCCACCGCGTTCCCGCTGCGCCGG
CCGTCGAGCATCGCCACCGAGGCGATGGCCCGGTACCTGCTGACCCGCAGCGAGGGCACGATAGGCGAACTCGCCCACCT
GCTGACCCAGGCGGCGGTCGCGGCGATCGAGTCAGGCGAGGAGGCGATCAACCAGCGCACCCTGCGGCTGTCGACCTACG
CCGGCCCGTCCGAACGGCGCCGACAGTTCGAACGAGAACTCGCATGA

Protein sequence :
MGSSTGSGVEGDPDLEHLRPEIRPIACLPGEERLRFVRADRWIGYSRAAASLERLEELYGWPGRQRMPNMLLIGPTNNGK
SMIVEKFRRGHPPISHPDREEIPVLVVQMPSEPSVTRFYVAVLAAMGAPLRPRQRLAELEQATLTLLRAVGVRMLVIDEL
HNVLAGSSDRRREFLNLIRFLGNELRIPLVGVGTREAYLAIRSDDQLENRFQPFPLPRWEPDQESCSLLASFATAFPLRR
PSSIATEAMARYLLTRSEGTIGELAHLLTQAAVAAIESGEEAINQRTLRLSTYAGPSERRRQFERELA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tniBdelta1 YP_006098382.1 transposition protein Not tested Tn2411 Protein 3e-94 75
tniB ACY75526.1 TniB Not tested Tn6060 Protein 2e-94 75
tniB ACY75529.1 TniB Not tested Tn6060 Protein 2e-94 75
tniB delta AET25392.1 TniB delta Not tested PAGI-2(C) Protein 2e-94 75
tniB delta AFG30115.1 TniB delta Not tested PAGI-2 Protein 2e-94 75