Gene Information

Name : Namu_3349 (Namu_3349)
Accession : YP_003202666.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3685711 - 3686484 bp
Length : 774 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_PC0000768 short chain dehydrogenase/reductase protein

DNA sequence : 
ATGACCATCTCCCGCCCGCCGCAACGCACCGCCGTGATCACCGGAGTGGGCGCCGAGCGCGGCATCGGCCGGGCCACCGC
GCACCGCTTCGCCCGGGACGGCTGGGCCATCGTCGGCCTCGACCTGGACGGCGACGCCGCGGAAAAGCTGGCCGCCGAGT
TGACCGAGCGCTACGGCGTGCCCGCGTTCGGCGCTGCGGTGGACGTTGCCGACGAAGCGTCGGTCCTGGCGGTGCGGGAC
GCGGTCGCCGCGGCGAACCTGCCCACGGTTGGGGCCGTGCTCAACATCGCCGGTATCACCTCACCCGTGCCGTTCCTGGA
CACCACCGTCGAGCTGTGGAACCGGATCTTCGCGGTCAACGTCACCGGCACCTACCTGGTGACCAAGGCGTTCCTGCCGG
ACATGATCGCCGGCGGCTACGGCCGGGTGTTGAACATGTCCTCGGTGTCCGCGCAACAGGGCGGCGGCGTCTTCGGCAAG
ACCCCCTACTCCTCGGCCAAGGCCGCGGTCCTGGGCTTCACCAAGGCGCTGGCCCGCGAACTCGGCCCCACCGGCATCAC
CGTCAACGCCCTCACGCCGGGCGCGGTCGACACCGACATCCGGGTCCACGGCACCACCCCCGAGATCGAGGAGGCCATCG
TCAAGTCGATCCCGCTGGGTCGGCAGGCCTCGGTGGACGACGTCACCAGCCTGTTCGCGTTCCTGGCTTCCGAGGAGGCC
GGTTACCTGACCGGCACCACCCAGAACGTCAACGGCGGCTCCTACTTCTCCTGA

Protein sequence : 
MTISRPPQRTAVITGVGAERGIGRATAHRFARDGWAIVGLDLDGDAAEKLAAELTERYGVPAFGAAVDVADEASVLAVRD
AVAAANLPTVGAVLNIAGITSPVPFLDTTVELWNRIFAVNVTGTYLVTKAFLPDMIAGGYGRVLNMSSVSAQQGGGVFGK
TPYSSAKAAVLGFTKALARELGPTGITVNALTPGAVDTDIRVHGTTPEIEEAIVKSIPLGRQASVDDVTSLFAFLASEEA
GYLTGTTQNVNGGSYFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 7e-36 46
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 6e-36 46
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-37 46
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-35 45
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 7e-36 45