Gene Information

Name : Namu_2447 (Namu_2447)
Accession : YP_003201806.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2699280 - 2699606 bp
Length : 327 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_4952 transposase IS3/IS911 family protein

DNA sequence :
ATGCCAGCACCACGCCAGTACGACCAGGAGACCCGTGACCGTGCAGTGCGGATGTACCGGGAACGCCGATCCGCGCATCC
GGCCGAGTCGGCGATCGAGGCCCGCCGGCAGATTGGCGCGCTGATCGACGTGAAATCCGAGACCCTCCGGGGGTGGATCG
AGCGGTCCGAGATCGACGCCGGCGTGCGGCCGGGCACCACCAGCGACGAGCACACCGAGTTGGTCCGGCTGCGCCGGGAG
GTGGCCGAACTACGCCGTGCAAACGAAATCCTGCGCACCGCTTCGGCGTTTTTCGCAGCGGCGGAGCTCGACCGCCGACT
CAAGTGA

Protein sequence :
MPAPRQYDQETRDRAVRMYRERRSAHPAESAIEARRQIGALIDVKSETLRGWIERSEIDAGVRPGTTSDEHTELVRLRRE
VAELRRANEILRTASAFFAAAELDRRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 0.001 42
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 0.007 42
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 0.007 42
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 0.005 42
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 7e-05 42
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 0.007 42
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 0.005 42
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 7e-05 42
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 0.007 42
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 7e-05 42
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 0.001 42
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 7e-05 42
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 0.001 42
CDC7B_2036 YP_005163477.1 hypothetical protein Not tested Not named Protein 0.001 42
CDCE8392_1959 YP_005134490.1 hypothetical protein Not tested Not named Protein 5e-04 42
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 9e-05 41
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 0.019 41
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 0.027 41
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 9e-05 41
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 0.019 41
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 0.027 41
unnamed AAF09023.1 unknown Not tested SHI-O Protein 0.006 41
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 0.006 41
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 1e-04 41
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 9e-05 41
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 9e-05 41
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 0.027 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Namu_2447 YP_003201806.1 transposase IS3/IS911 family protein VFG0643 Protein 0.002 42
Namu_2447 YP_003201806.1 transposase IS3/IS911 family protein VFG1717 Protein 0.008 41