Gene Information

Name : Namu_2423 (Namu_2423)
Accession : YP_003201785.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2674136 - 2675179 bp
Length : 1044 bp
Strand : -
Note : PFAM: transporter permease; KEGG: yen:YE3619 iron-enterobactin transporter membrane protein

DNA sequence :
ATGGCAGCCGGTCCCCTCGTCTCGACGCCTGCCGTGGCTGGTACCGGGATCGGCGGTGGGCGCGGGGTGCTCACCGTTGC
GGTCGGGGTGGGCCTGCTGGCCCTGCTCACGGTGGCCAGCGTCTTCATCGGGTCGGGCGATATTCCGGTCGCCGATGTGT
GGGCCGCACTGCAGCAGGATTCCGGCCGCTCCACCGATTTGATCGTGCGGCAGTTCCGGATTCCTCGCACCCTGCTGGCC
ATCGTGGTCGGCATTGCACTCGGCCTCGCCGGCGCGATCATCCAACCGCTCACCCGCAACCCGCTGGCCGACCCGGGCAT
CCTCGGCGTCAACGCCGGCGCCTATGCCGCGGTGGTCGGGGCCGCCGCCATCCTCGGATCCTCGATGACGACCGTCCTCG
TCGGCTTCGCGATGATCGGCGCCCTGGTGGCGGCGGTGATCGTCTACGGCGTCGGCACCACCGGGCCGGCCGGCGGGACC
CCGACCAGACTCGTACTCACCGGTGTCGCCCTCGGCGCGGTGCTGACCGGGATCAGCTTCGCCGTCACCCTGGTCAAACC
CGAGGTCTTCGATCGGGTGCGATTCTGGAGCGCCGGGTCGTTGCAGGGACGTCAGTTCGACACGCTCTGGGCCGTCCTGC
CGTTCATCGTGCTGGGCACGATCATCGCGCTGCTGCTGCCCCGGGCCCTGAATGCGCTGTCGCTGGGTGAGGACCTGGCC
GTGTCCCTGGGGTCCCGTCCGGGGACCACCAAGCTGGCCGGAGTCCTCGCCGTCACCCTGCTCTGCGGCGCGGCCACCGC
CGCGGCCGGGCCGATCGCGTTCGTCGGGCTGATGGTGCCGCATGTGCTGCGCGCCATCGTGGGTCCCGACCAGCGCTGGA
TCATCCCGCTGAGCCTGCTGGCCGCCCCCGTGCTCCTGCTCACCGCGGACATCCTCGGCCGGGTCGTGGTCTCCGCCGAA
CTGCCGGTCGGCGTCGTCACAGCGTTCCTCGGGGCGCCCGTGCTCATCGCCCTGACCCGGCGCAAGGGGGTCCGCGGGCT
GTGA

Protein sequence :
MAAGPLVSTPAVAGTGIGGGRGVLTVAVGVGLLALLTVASVFIGSGDIPVADVWAALQQDSGRSTDLIVRQFRIPRTLLA
IVVGIALGLAGAIIQPLTRNPLADPGILGVNAGAYAAVVGAAAILGSSMTTVLVGFAMIGALVAAVIVYGVGTTGPAGGT
PTRLVLTGVALGAVLTGISFAVTLVKPEVFDRVRFWSAGSLQGRQFDTLWAVLPFIVLGTIIALLLPRALNALSLGEDLA
VSLGSRPGTTKLAGVLAVTLLCGAATAAAGPIAFVGLMVPHVLRAIVGPDQRWIIPLSLLAAPVLLLTADILGRVVVSAE
LPVGVVTAFLGAPVLIALTRRKGVRGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 6e-21 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 6e-21 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 6e-21 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 6e-21 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Namu_2423 YP_003201785.1 transporter permease VFG0926 Protein 8e-26 54