Gene Information

Name : Namu_1779 (Namu_1779)
Accession : YP_003201158.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 1954174 - 1955697 bp
Length : 1524 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: mxa:MXAN_5040 aldehyde dehydrogenase family protein

DNA sequence :
GTGACGGTCTATGCAGCTCCGGGGCAGCCGGGCAGCAAGGTCAGCTTCAAGCCCCGCTACGAGAACTACATCGGTGGCGA
GTGGACGCCGCCGGTCAAGGGCCAGTACTTCGAGAACGTCACCCCGGTAACCGGCCAGGTGTTCACCGAGGTCGCGCGGT
CCACCGCGGAAGATGTCGAGCTGGCGCTGGATGCCGCGCACAACGCCGCTCCCTCATGGGGCAAGACGTCGGTGGCCGAG
CGCTCGGTCATCCTGAACAAGATCGCCGACCGCATCGAGGCCAACCTGGAGACCATCGCGGTCGCCGAGACCTGGGACAA
CGGCAAGCCGGTCCGCGAGACCCTGGCCGCCGACATCCCGCTGGCCATCGATCATTTCCGCTACTTCGCGGGCGCCATCC
GGGCCCAGGAAGGCTCGATCTCGCAGATCGACGCGGACACCGTGGCCTATCACTTCCAGGAGCCGTTGGGCGTTGTCGGC
CAGATCATCCCCTGGAACTTTCCGATCCTGATGGCCGTCTGGAAGCTGGCGCCCGCGCTGGCCGCCGGTAACGCGGTCGT
GCTCAAGCCGGCCGAGCAGACCCCCGCCTCGATCCTGGTGCTGCTGGAGATCATCGGGGACCTGCTGCCGCCCGGCGTGG
TCAACGTCGTCAACGGGTTCGGTGTGGAGGCCGGCAAGCCGCTGGCGTCCTCCAAGCGGATCCGCAAGATCGCCTTCACC
GGTGAGACCACCACCGGCCGGCTGATCATGCAGTACGCGTCCGAGAACCTGATCCCGGTCACCCTGGAGTTGGGCGGCAA
GTCGCCCAACATCTTCTTCGAGGACGTCGCCGCGCAGCGGGACGCGTTCTACGACAAGGCGCTCGAGGGCTTCACCATGT
TCGCGCTGAACCAGGGTGAGGTGTGCACGTGCCCGTCCCGGGCGCTGATCCAGTCCTCGATCTACACCGACTTCCTGGCC
GACGCGGTGGCCCGGACCGAGAAGGTCATCCAGGGCAACCCGCTGGACACCACGACGATGATCGGCGCGCAGGCCTCCAA
CGATCAGCTGGAGAAGATCCTGTCCTACATCGAGATCGGCAAGGCCGAGGGGGCCAAGGTCCTGACCGGCGGCGAGCGCA
CCATCCTCGAAGGCGATCTGGCCGGGGGCTTCTACGTCCAGCCGACGATCTTCGAGGGCGACAACTCGATGCGGGTCTTC
CAGGAGGAGATCTTCGGTCCGGTCGTGGCCGTGACCTCGTTCGCCGATCCCGACGACGCCCTCAAGATCGCCAACGACAC
CCTGTACGGGCTGGGCGCCGGGGTGTGGACCCGCAGCGGGGCCCAGGCCTACGCGACCGGTCGTGGCATCGAGGCCGGCC
GGGTGTGGACGAACTGCTACCACCAGTACCCCGCGCACGCGGCGTTCGGCGGTTACAAGCAGTCCGGCATCGGCCGGGAG
AACCACCACATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTCGTGTCCTACGCCCAGAGCGCGGTCGGATTCTT
CTGA

Protein sequence :
MTVYAAPGQPGSKVSFKPRYENYIGGEWTPPVKGQYFENVTPVTGQVFTEVARSTAEDVELALDAAHNAAPSWGKTSVAE
RSVILNKIADRIEANLETIAVAETWDNGKPVRETLAADIPLAIDHFRYFAGAIRAQEGSISQIDADTVAYHFQEPLGVVG
QIIPWNFPILMAVWKLAPALAAGNAVVLKPAEQTPASILVLLEIIGDLLPPGVVNVVNGFGVEAGKPLASSKRIRKIAFT
GETTTGRLIMQYASENLIPVTLELGGKSPNIFFEDVAAQRDAFYDKALEGFTMFALNQGEVCTCPSRALIQSSIYTDFLA
DAVARTEKVIQGNPLDTTTMIGAQASNDQLEKILSYIEIGKAEGAKVLTGGERTILEGDLAGGFYVQPTIFEGDNSMRVF
QEEIFGPVVAVTSFADPDDALKIANDTLYGLGAGVWTRSGAQAYATGRGIEAGRVWTNCYHQYPAHAAFGGYKQSGIGRE
NHHMMLDHYQQTKNLLVSYAQSAVGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-145 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-153 62
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-153 62
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-153 62
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-153 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Namu_1779 YP_003201158.1 aldehyde dehydrogenase VFG0082 Protein 3e-145 63