Gene Information

Name : Namu_1641 (Namu_1641)
Accession : YP_003201020.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1807873 - 1808706 bp
Length : 834 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: tmz:Tmz1t_1082 IstB domain protein ATP- binding protein

DNA sequence :
ATGACCACCACCACCACGGACGACGCGCCGCCGCCGGCCACCCCGGCCGAGAACAGCCGCTACCAACAGCTCCGCGCCCA
CCTGACCACGCTGAAGCTGCTCGACGCGGCCGCGGCCCTGCCGGCCGTCCTGGACCAGGCCCGCGCCGAGAACCTCACCA
TGACCGCGGCTCTGGAACGGCTGCTGCGGATCGAGGTCACTGCGACCGAGGCCCGGCGGCTCGCCGGCCGGCTCCGGTTC
GCCTGCCTGCCCACCGACGCGACCCTGGAGGAGTTCGACTACGACGCCCAACCCGGCGTCGACCCCCGGCTGGTCAACGA
CCTCGCGTCGTGCCGCTACCTCGAGTCCGCCACCAACGTGCTGATGATCGGACCGCCCGGTGTCGGCAAAACCATGCTCG
CCACCGGCCTAGCCCGCAAAGCCGCCGAGGCCGGCTACCGCACCTACTTCACCACCGCCGCCGACCTCGCAGCCCGCTGC
CACCGGGCCGCGATCGAAGGTCGGTGGGCCACCACCATGCGCTTCTACGCCGGCCCCACCCTGCTCGCGATCGACGAACT
GGGCTATTTGCCGTTGCCGGCAGAGGCCGCGTCCGCGTTGTTCCAGGTCGTGGCCCAGCGGTACCTCAAGACCTCGATCA
TTCTGACCACAAATAGGCCGGTGACGTCCTGGGGAGAAGTCCTGGGCGACAACATGGTCGCGGCCGCACTACTCGATCGC
CTCTTGCACAGATCGGTCGTCCTCGACATCGCCGGGGATTCGTACAGACTCCGCGATCACCACGCCCGAACCGACAAAAT
CCGCGCCGGCACCCGCACCGGCACGCTACGCTGA

Protein sequence :
MTTTTTDDAPPPATPAENSRYQQLRAHLTTLKLLDAAAALPAVLDQARAENLTMTAALERLLRIEVTATEARRLAGRLRF
ACLPTDATLEEFDYDAQPGVDPRLVNDLASCRYLESATNVLMIGPPGVGKTMLATGLARKAAEAGYRTYFTTAADLAARC
HRAAIEGRWATTMRFYAGPTLLAIDELGYLPLPAEAASALFQVVAQRYLKTSIILTTNRPVTSWGEVLGDNMVAAALLDR
LLHRSVVLDIAGDSYRLRDHHARTDKIRAGTRTGTLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-29 44
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 4e-29 43
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 4e-29 43
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 4e-29 43
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 4e-29 43
api84 CAF28558.1 putative transposase Not tested YAPI Protein 4e-29 43
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-29 43
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 5e-29 43
unnamed CAA21402.1 - Not tested HPI Protein 5e-29 43
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 5e-29 43
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 5e-29 43
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-29 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Namu_1641 YP_003201020.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 6e-30 44
Namu_1641 YP_003201020.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 2e-29 43
Namu_1641 YP_003201020.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 2e-29 43
Namu_1641 YP_003201020.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 2e-29 43