Gene Information

Name : Dret_0965 (Dret_0965)
Accession : YP_003197831.1
Strain : Desulfohalobium retbaense DSM 5692
Genome accession: NC_013223
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : 6.1.1.11
Position : 1138547 - 1139827 bp
Length : 1281 bp
Strand : -
Note : KEGG: dvl:Dvul_2740 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like

DNA sequence :
ATGCTCGACCTCAAATTCGTGCGCAAGTCTCCTGAAACCGTCAAGGACGCCTTGCGCAAACGGAATATGGACCTCGATCT
GGACGCCTTTCAGGCCATCGACGCCAAGCGCCGGGAATACCTCCAGGAAGTCGAAGACCTCAAAAGCCGCCGCAACGAGG
TCTCCAAACAGATCGGCCAGCGCAAGAAAAACGGCGAGGACGCTGAGGACCTCATCCAGGCCATGGGTGAAGCAGCCGAA
CGCATCAAGGAACTCGATGCTCTGGCCAAGGAGGCTGAGGCCGAGGTCCAGGACTGGATGCTCTCCCTGCCCAATATTCC
TGATACCAGTGTCCCCGATGGCGAAGACGATGCCGACAACGAGGAACTGCGCACCTGGGGCGCGCTGCCCACCTTTTCGT
TCCTTCCCAAAGAACACTGGGAACTCGGTGTCCAATTGAGCGGTCTCGATTTCGAACGCGCCGCCAAGCTCACCGGCAGC
CGTTTCGCGGTCTACTGGGGCTGGGCAGCCAAGCTCGAACGCGCTCTCGCCCAGTTTATGCTCGACATCCAGACCACCGA
GCACGACTACACCGAGGTCATGCCGCCGGTTATCGTCAACAGCCAGACCATGCGCGGTACTGGACAACTCCCGAAATTCG
AGGAAGACCTCTTCAAGCTCGAAGGATGGGAGTACTACCTCATCCCCACGGCCGAGGTCCCGCTGACCAATCTTCACGCC
GGCGAAGTGCTCGACGAGCAGGACTTGCCGCGCGGTTACGCCGCCTTCACCCCCTGTTTCCGTTCCGAGGCAGGGTCCTA
TGGCAAGGACACCAAAGGGCTCATCCGCCAGCACCAGTTCAACAAGGTCGAGCTGGTCCGATTTGCCCATCCGGACCATT
CCTTTGAGGAGCTCGAAAACCTCCTCGGTCATGCCGAGACTGTGCTCAAGCGCCTGGAACTGCCCTACCGCGTCGTCACC
CTCTGTGGGGGCGACATCGGCTTCTCCGCGGTCAAAACCTACGATCTCGAGGTGTGGCTGCCCGGGCAGGACACATACCG
GGAGATCTCTTCCTGCTCCAATTGCGGCGATTTCCAGGCCCGTCGCGCCGGCATTCGCTTCAAACGCGCCGGGGCCAAAA
AGGCTGAATTCCTGCATACATTGAACGGATCCGGCCTGGCTGTAGGACGCACATTGGTCGCGGTGCTGGAAAATTATCAG
CAAGAGGACGGTTCGGTGGCGATCCCGGAGGCGCTGAAACCCTATATGGGCGGGCTCGAGCGGATCACCCCCAAAAATTG
A

Protein sequence :
MLDLKFVRKSPETVKDALRKRNMDLDLDAFQAIDAKRREYLQEVEDLKSRRNEVSKQIGQRKKNGEDAEDLIQAMGEAAE
RIKELDALAKEAEAEVQDWMLSLPNIPDTSVPDGEDDADNEELRTWGALPTFSFLPKEHWELGVQLSGLDFERAAKLTGS
RFAVYWGWAAKLERALAQFMLDIQTTEHDYTEVMPPVIVNSQTMRGTGQLPKFEEDLFKLEGWEYYLIPTAEVPLTNLHA
GEVLDEQDLPRGYAAFTPCFRSEAGSYGKDTKGLIRQHQFNKVELVRFAHPDHSFEELENLLGHAETVLKRLELPYRVVT
LCGGDIGFSAVKTYDLEVWLPGQDTYREISSCSNCGDFQARRAGIRFKRAGAKKAEFLHTLNGSGLAVGRTLVAVLENYQ
QEDGSVAIPEALKPYMGGLERITPKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 6e-109 57