|
Name : Dret_0965 (Dret_0965) Accession : YP_003197831.1 Strain : Desulfohalobium retbaense DSM 5692 Genome accession: NC_013223 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1138547 - 1139827 bp Length : 1281 bp Strand : - Note : KEGG: dvl:Dvul_2740 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : ATGCTCGACCTCAAATTCGTGCGCAAGTCTCCTGAAACCGTCAAGGACGCCTTGCGCAAACGGAATATGGACCTCGATCT GGACGCCTTTCAGGCCATCGACGCCAAGCGCCGGGAATACCTCCAGGAAGTCGAAGACCTCAAAAGCCGCCGCAACGAGG TCTCCAAACAGATCGGCCAGCGCAAGAAAAACGGCGAGGACGCTGAGGACCTCATCCAGGCCATGGGTGAAGCAGCCGAA CGCATCAAGGAACTCGATGCTCTGGCCAAGGAGGCTGAGGCCGAGGTCCAGGACTGGATGCTCTCCCTGCCCAATATTCC TGATACCAGTGTCCCCGATGGCGAAGACGATGCCGACAACGAGGAACTGCGCACCTGGGGCGCGCTGCCCACCTTTTCGT TCCTTCCCAAAGAACACTGGGAACTCGGTGTCCAATTGAGCGGTCTCGATTTCGAACGCGCCGCCAAGCTCACCGGCAGC CGTTTCGCGGTCTACTGGGGCTGGGCAGCCAAGCTCGAACGCGCTCTCGCCCAGTTTATGCTCGACATCCAGACCACCGA GCACGACTACACCGAGGTCATGCCGCCGGTTATCGTCAACAGCCAGACCATGCGCGGTACTGGACAACTCCCGAAATTCG AGGAAGACCTCTTCAAGCTCGAAGGATGGGAGTACTACCTCATCCCCACGGCCGAGGTCCCGCTGACCAATCTTCACGCC GGCGAAGTGCTCGACGAGCAGGACTTGCCGCGCGGTTACGCCGCCTTCACCCCCTGTTTCCGTTCCGAGGCAGGGTCCTA TGGCAAGGACACCAAAGGGCTCATCCGCCAGCACCAGTTCAACAAGGTCGAGCTGGTCCGATTTGCCCATCCGGACCATT CCTTTGAGGAGCTCGAAAACCTCCTCGGTCATGCCGAGACTGTGCTCAAGCGCCTGGAACTGCCCTACCGCGTCGTCACC CTCTGTGGGGGCGACATCGGCTTCTCCGCGGTCAAAACCTACGATCTCGAGGTGTGGCTGCCCGGGCAGGACACATACCG GGAGATCTCTTCCTGCTCCAATTGCGGCGATTTCCAGGCCCGTCGCGCCGGCATTCGCTTCAAACGCGCCGGGGCCAAAA AGGCTGAATTCCTGCATACATTGAACGGATCCGGCCTGGCTGTAGGACGCACATTGGTCGCGGTGCTGGAAAATTATCAG CAAGAGGACGGTTCGGTGGCGATCCCGGAGGCGCTGAAACCCTATATGGGCGGGCTCGAGCGGATCACCCCCAAAAATTG A Protein sequence : MLDLKFVRKSPETVKDALRKRNMDLDLDAFQAIDAKRREYLQEVEDLKSRRNEVSKQIGQRKKNGEDAEDLIQAMGEAAE RIKELDALAKEAEAEVQDWMLSLPNIPDTSVPDGEDDADNEELRTWGALPTFSFLPKEHWELGVQLSGLDFERAAKLTGS RFAVYWGWAAKLERALAQFMLDIQTTEHDYTEVMPPVIVNSQTMRGTGQLPKFEEDLFKLEGWEYYLIPTAEVPLTNLHA GEVLDEQDLPRGYAAFTPCFRSEAGSYGKDTKGLIRQHQFNKVELVRFAHPDHSFEELENLLGHAETVLKRLELPYRVVT LCGGDIGFSAVKTYDLEVWLPGQDTYREISSCSNCGDFQARRAGIRFKRAGAKKAEFLHTLNGSGLAVGRTLVAVLENYQ QEDGSVAIPEALKPYMGGLERITPKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-109 | 57 |
