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Name : Dret_0898 (Dret_0898) Accession : YP_003197767.1 Strain : Desulfohalobium retbaense DSM 5692 Genome accession: NC_013223 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 1063726 - 1065039 bp Length : 1314 bp Strand : - Note : PFAM: UMUC domain protein DNA-repair protein; KEGG: dma:DMR_28930 UmuC protein DNA sequence : ATGTCCAGCACCCAAACTTTTTTCCCGTCCAACGCCCCCCGCGGCATGGTCTATGCCCTGGTGGACTGCAACAATTTCTA TGTCTCCTGCGAACGGGTCTTTGCTCCCCGCCTGCAAGGCAGACCGGTGGTCGTCTTGTCCAATAACGACGGCTGCATCA TCGCTCGCTCCGAGGAGGCCAAGACGCTGGGCATCGCCATGGGCGAGCCGTTTCACAAGCGTGAACCTTTCCTGCGCCGG GAGGGCGTAAACGTCTTTTCCTCCAACTACCCCCTCTACGGCGACATGTCCGCCCGGGTCATGGAGGCCCTCTCGCGGTT CACCCCGCACCAGGAAATTTACTCCATCGATGAATGTTTTCTCGGTTTCGTCCCGGCCCCGGACGCCGACCTGCTCTGCA CAGCCCGGCATATCAGGGAAACGGTCCGGCAATGGACGGGCATCCCGGTCTCCGTCGGACTGGCCCCGACCAAGACATTG GCCAAAATCGCCAACCGGTGCGCCAAAAAAGACCCGGCCAGCAAAAACGTTTGCCTGCTTGGGGACACCACAACCATCGA GCAAACCCTGGCCCGGACCGACGTCGAAGACATCTGGGGCATCGGCCGCCGCTACGCCCGTTTTCTGCACACTCGCGGCG TGGACACCGGACTGGACCTTGTGCGCATGCCCCGGGACTGGGTGCGTAACCACCTGACCGTGGTCGGGTTGCAGACCGTG CTCGAACTGGACCGCCAACCCTGCTTTGTCCTGGAAACCACGCCCGCCCCGGCGAAAAGCATCGTCTGTTCGCGTTCTTT TGGTCGCCGCATCCGGGACAAACAGGCTCTCGGTGAAGCGCTCGCCCGCCATATCCAACGGGCCGCCGAACGGTTGCGCG CCAAGGGGCTCCTGGCCCACACCGTCCGCGTTGCCCTGGAGACGAACCGTTTCCAACCCGGCCCCCAATACGCCGCCCGG CGCTGTCAGACCTTGTTGCACCCCACTGACGCCACCCCGGCGCTGCACAAGGCCGCCCAGGGCCTGCTCGACGTCCTGTA CCGTTCCGGCTTCGCCTACCAGAAAATCGGGGTCACCCTCCTCGAACTGGTTCCCCACAACCACCGCCAAGCCTCGCTCT TTCCGCCCGCAGCGGCCGAAACCGGCCGGCAACGCGACCTCATGCGCACCGTGGACCACCTGAACACCGTCTACGGTCGC GACACCGTGACCTGGGCCGCCTCAGGACTGGGCCCCCAACAATGGCATATGCGCCAGAATCATGTTTCGCCCCGGTACAC CACGGCTTGGGACGAATTGCCCTGCGTGGGCTGA Protein sequence : MSSTQTFFPSNAPRGMVYALVDCNNFYVSCERVFAPRLQGRPVVVLSNNDGCIIARSEEAKTLGIAMGEPFHKREPFLRR EGVNVFSSNYPLYGDMSARVMEALSRFTPHQEIYSIDECFLGFVPAPDADLLCTARHIRETVRQWTGIPVSVGLAPTKTL AKIANRCAKKDPASKNVCLLGDTTTIEQTLARTDVEDIWGIGRRYARFLHTRGVDTGLDLVRMPRDWVRNHLTVVGLQTV LELDRQPCFVLETTPAPAKSIVCSRSFGRRIRDKQALGEALARHIQRAAERLRAKGLLAHTVRVALETNRFQPGPQYAAR RCQTLLHPTDATPALHKAAQGLLDVLYRSGFAYQKIGVTLLELVPHNHRQASLFPPAAAETGRQRDLMRTVDHLNTVYGR DTVTWAASGLGPQQWHMRQNHVSPRYTTAWDELPCVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 4e-62 | 42 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 4e-62 | 42 |
