Gene Information

Name : Dret_0085 (Dret_0085)
Accession : YP_003196965.1
Strain : Desulfohalobium retbaense DSM 5692
Genome accession: NC_013223
Putative virulence/resistance : Unknown
Product : alanine racemase domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 115576 - 116283 bp
Length : 708 bp
Strand : +
Note : PFAM: alanine racemase domain protein; KEGG: dma:DMR_46160 hypothetical protein

DNA sequence :
ATGGATACACAGACGCCCTATGCCGAGCGGGTGCAAGAGATCAAGGAAACGATGGCCGCGGCAGCGCGCGCGGCCGACCG
CGATCCGGCCGAAGTGACCCTGGTCGCTGTTTCCAAATATCAACCGATAGAGGCCATTGCCGCCGTGCATGCCGCGGGGC
AGACCCATTTTGGGGAGAATTACATTCAGGAGGCCCTGGATAAACAGGACCAATGCGACATCTCCCCCATCCAGTGGCAT
TTCATCGGCCATTTGCAGCGCAACAAAGCCAAATTCGTGCCTGGGCGCTTTGATCTGGTGCACACCGTGGATTCGGTGCG
CCTGGCGCAGATGCTGGATAAAAAAGCCGCGGAAGCTGGTGTGGTGCAGGCCATATTGCTGCAGGTCAGCCTGGCCGGAG
AAGAGCAGAAGGCGGGGCTGGCACCGGAAGCATTGGAGGAGACCCTTGACACGGTGGGGCAGCTGCCCCACCTGCAACTG
CAGGGGTTTATGACCATGCCGCCGTATTTTAATGACCCGGAACGGGTCCGTCCTCTCTTTTGCCGTCTGCGCGAACTCCG
TGACGAGGCGCAAAACCAGCTGGGCAGGGAGTTGCCGCATTTGTCGATGGGCATGAGCGGGGATTTTGAGGTGGCCATCG
CTGAGGGCGCGACCCTGGTGCGCGTCGGGACCCGGATTTTCGGGCCGCGGCCGCAAAAGAGCCTGTAG

Protein sequence :
MDTQTPYAERVQEIKETMAAAARAADRDPAEVTLVAVSKYQPIEAIAAVHAAGQTHFGENYIQEALDKQDQCDISPIQWH
FIGHLQRNKAKFVPGRFDLVHTVDSVRLAQMLDKKAAEAGVVQAILLQVSLAGEEQKAGLAPEALEETLDTVGQLPHLQL
QGFMTMPPYFNDPERVRPLFCRLRELRDEAQNQLGRELPHLSMGMSGDFEVAIAEGATLVRVGTRIFGPRPQKSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 3e-29 45
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-29 45
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-29 45
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-29 45