Gene Information

Name : Dret_0584 (Dret_0584)
Accession : YP_003197459.1
Strain : Desulfohalobium retbaense DSM 5692
Genome accession: NC_013223
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 706544 - 707302 bp
Length : 759 bp
Strand : +
Note : TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: pca:Pcar_1166 flagellar biosynthesis protein FliP

DNA sequence : 
ATGACCATGTCCCGGGCACTTTTTGGGGTCGTTTTCGCGACGGCAGTGGGAATTCTGCTTTTGCCACAGGCGGGCTGGGG
CTTTGAAATCCCGCGCCTGACCTTAGGGGTAGACGGTACCAACGATCCGGATCAGGTGGCTACCGGCATCCAGATCCTTT
TCCTCCTCACTGTCTTGTCTTTGGCGCCAGCCATTTTGCTCATGACCACGAGTTTTATTCGTATCGTGATTGTGCTCTCG
TTTATTCGTCAAGCCATGGGCGTGCGGCAGATGCCCCCGAACCAGGTCATCATCGGTTTAGCCCTGTTTTTAACTTTTTT
TATCATGAGCCCGGTTCTGAGTCAGATGAACCAGGACGCTTTACAGCCGTATCTGGACCAGGAAATTGGGGACGCCCAGG
CCATCGAACGGGCGGTTTCACCCATGCGGGAATTCATGTTCAACCAGGTCCGCCAGAAGGATCTGCAGCTCTTTGTAGAC
ATCTCCGGATCAGATCAACCCGAGACTCGGGAAGAGATCAGGACCATGTTGTTAGTGCCAGCATTTATGCTCTCGGAGAT
CAAACGGGCCTTCCAGATCGGTTTTTTAATTTTTGTGCCCTTTCTGGTTATTGATATGGTGACCGCGAGTGTACTTATGA
GTATGGGGATGCTCATGCTACCGCCGGTGATCATTTCCTTGCCGTTCAAGATCTTGCTTTTCGTTCTCGTTGACGGCTGG
CATTTGGTGGTCGGTTCACTTGTACGCAGTTTCCAGTAA

Protein sequence : 
MTMSRALFGVVFATAVGILLLPQAGWGFEIPRLTLGVDGTNDPDQVATGIQILFLLTVLSLAPAILLMTTSFIRIVIVLS
FIRQAMGVRQMPPNQVIIGLALFLTFFIMSPVLSQMNQDALQPYLDQEIGDAQAIERAVSPMREFMFNQVRQKDLQLFVD
ISGSDQPETREEIRTMLLVPAFMLSEIKRAFQIGFLIFVPFLVIDMVTASVLMSMGMLMLPPVIISLPFKILLFVLVDGW
HLVVGSLVRSFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 6e-35 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dret_0584 YP_003197459.1 flagellar biosynthetic protein FliP VFG2338 Protein 4e-50 53
Dret_0584 YP_003197459.1 flagellar biosynthetic protein FliP VFG2016 Protein 8e-54 53
Dret_0584 YP_003197459.1 flagellar biosynthetic protein FliP VFG2494 Protein 3e-55 53
Dret_0584 YP_003197459.1 flagellar biosynthetic protein FliP VFG1259 Protein 2e-56 51