|
Name : Dret_0556 (Dret_0556) Accession : YP_003197431.1 Strain : Desulfohalobium retbaense DSM 5692 Genome accession: NC_013223 Putative virulence/resistance : Unknown Product : heat shock protein HslVU, ATPase subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 667299 - 668723 bp Length : 1425 bp Strand : + Note : KEGG: dma:DMR_38380 ATP-dependent hsl protease ATP- binding subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase DNA sequence : ATGGACTATACCGAGACATCTCATACGATAGCTTTGGGGCCGACTGAGTCGGAAGGGAGTGCCAATAGCCCCCTTACCCC GCGTGAAATTGTTGCCGAACTCGATAAATTCGTGATTGGTCAGGATGAGGCCAAGCGCATGGTGGCTATTGCCCTTCGCA ACCGGTGGCGCAGGCAGCAATTGGATCCGGAACTGGCCGAAGAGATCGCCCCCAAAAATATCATCATGATCGGCCCCACA GGGGTAGGCAAGACCGAGATCGCCCGTCGGCTGGCCAAGTTGGCTCGGGCGCCTTTTTTTAAAGTGGAAGCCTCGAAGTT CACGGAAGTGGGCTATGTGGGACGTGATGTCGAGTCCATGATCCGGGATTTGATGGAAATCGGAATCACCCTGGTTCGTC AGGAAGAAATGGATCGCGTGCGCGGCAAGGCTGAAGAGCAGGCCGAGGAAAAACTCCTGGATCTGCTCCTGCCCCGCGGT GGGAAAGAGGACACGGCCCCATCGGGGCAGACCTTTTCTGATGCAGCCGCGAGCGGTGAGGGCGCCAAACAGTCCACACG GGAAAAATTCCGGACCCTTTTTCGGCAGGGACGGCTCGATGACCGTCTGGTCGAAGTCCAGGTTCAGGCTCAGGGACCGC AGCTGCAAATGGCCTCCATGCCCGGCATGGAGGAGATGGAGACGCAGTTCAAAGACATGTTCAGCAAGATCATGCCCAAA AAGAGCAAGACCCGGAAAATGCAGGTCCGTGACGCCTACGAGCATCTGGTCCAAGAGGAGAGCGACAAGCTGATCGATAT GGACAAGGTCAGTGAGAAGGCACGGGAACGTGTCGAGCAAAACGGGATTATTTTTCTTGATGAAATCGACAAGGTCTGCA GTCAGCGCGAAGGTGGCCAGACCGATGTTTCCCGGGAAGGCGTCCAGCGGGATCTGCTTCCGGTGGTCGAGGGATGTGTG GTGAACACCAAGCACGGCATGGTCCGCACCGATCATATCCTGTTTATTGCTGCCGGCGCTTTTCACTATGCCAAACCCTC TGATTTGATTCCCGAACTTCAGGGGCGTTTCCCTTTGCGCGTGGAGTTGGCGGCTTTGGAAAAAGCCGAATTTTATCGCA TCCTGACCGAACCGCAAAACGCCCTGACCGTCCAGTACGAGGCGTTGCTAGGAACGGAGCAGGTTGCCCTGTCCTTCACG GACGACGCTTTGCAGGAAGTGGCGGCATTTGCCCAGCGGGTCAATGAAGAGACCGAGAATATCGGGGCGCGCCGGTTGTA TACGATCATGGAAAAGATTTTGAACACCTTGTCCTTTGAGGCCCCGGACAAGGCTGGAATCGAAGTGGTCGTGGATGCGG AATATGTCCGTCAGCATCTGGAAGGACTCGAAGAAGATCGTGATTTGACGCGGTATATCCTCTAG Protein sequence : MDYTETSHTIALGPTESEGSANSPLTPREIVAELDKFVIGQDEAKRMVAIALRNRWRRQQLDPELAEEIAPKNIIMIGPT GVGKTEIARRLAKLARAPFFKVEASKFTEVGYVGRDVESMIRDLMEIGITLVRQEEMDRVRGKAEEQAEEKLLDLLLPRG GKEDTAPSGQTFSDAAASGEGAKQSTREKFRTLFRQGRLDDRLVEVQVQAQGPQLQMASMPGMEEMETQFKDMFSKIMPK KSKTRKMQVRDAYEHLVQEESDKLIDMDKVSEKARERVEQNGIIFLDEIDKVCSQREGGQTDVSREGVQRDLLPVVEGCV VNTKHGMVRTDHILFIAAGAFHYAKPSDLIPELQGRFPLRVELAALEKAEFYRILTEPQNALTVQYEALLGTEQVALSFT DDALQEVAAFAQRVNEETENIGARRLYTIMEKILNTLSFEAPDKAGIEVVVDAEYVRQHLEGLEEDRDLTRYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 9e-95 | 49 |
