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Name : Dret_2234 (Dret_2234) Accession : YP_003199096.1 Strain : Desulfohalobium retbaense DSM 5692 Genome accession: NC_013223 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2537231 - 2538745 bp Length : 1515 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dde:Dde_1365 lysyl-tRNA synthetase DNA sequence : TTGAGTAAGCAGAAGAAAGACAAAGCAGGGACTGAAAGTCAGGTCATCAAAAACCGCTGGGACAAAGCGCAGAATTTCGC CGAACAGGGTCTGGCGCTGTTCGGGAACACGTTTCGCAAGGATACGGATATTCAGGACCTGATCCAGTCCTATGAGTCCC TGAGCGCTGAAGATCTTGAAAACGTGGAGCACACGTTTGCCTTGGCCGGTCGGATCATGGCCATTCGCTCGTTTGGCAAG GCCACTTTCATGCATATCCAGGACAGCACCGGCAAACTCCAGGTCTTTGTCCAGCGTGATGCGGTCGGAGCTGATCTGTA CAAGCTCTTTAAAAAGTTCGATGTCGGTGACATCGTCGGTGTCCGGGGGACGCTTTTTCGGACCCGAACCGACGAATTGA CGCTCAAGGCGGAGCATGTCGAACTGGTCACCAAATCCATGCGGCCGCTTCCGGAAAAATACCACGGCCTCAAGGATGTC GAGACCAGGTATCGCCAGCGATACGTCGATCTGATCGTTACCCCCCAAGCTCGGGATATTTTTGTCAAACGGACCCGTAT CGTCCAAGGGTTACGCCATTTTCTGGACAATCGTGGCTTCATGGAGGTTGAGACCCCCATGATGCAGCACATTCCGGGCG GGGCGACGGCCCGGCCGTTTGTGACCCACCACAACGCGCTGGATATGGAGCTTTACCTGCGCATCGCGCCGGAGCTGTAT CTGAAGCGACTGTTGGTCGGCGGGTTGGAGCGGGTGTATGAAATCAACCGCAATTTCCGGAATGAAGGCATCTCCACACA GCACAATCCAGAATTCACCATGCTCGAATTCTATTGGGCCTACGCCGATGTCTACGATCTCATGGATCTGACCGAGGAGA TGTTTGCCCAATTGGCCCAGGACGTCTGCGGGACGACCCGGATTACCTATCAGGGGCAGGAGATCGAGCTTGGCGGCCGC TGGAACAGGTTGACCTTCCACCAGGCCCTGGAGGAGATCGGGGGACTTGAGCCGCAGCAGTATCAGGACCATGATCAGGC CCAGGCCCTGGTCCAGCGGCTGGGCGAGAATGTCCAGACCGGAGAGCAACTCGGCAAGACCCAAGCCAAATTGTTCGATC TGCTGGTGGAGCCCAAACTCATCCAGCCCCACTTTATTTCGCACTACCCGACCGACATTTCCCCCTTGTCCCGGCGCAAT GAGGAGAACCCTGAACTCACAGACCGCTTTGAACTGTTTATTTGCGGCCGTGAAATGGCCAACGCGTTTTCCGAACTCAA CGACCCCTTTGACCAGCGGCAGCGCTTCGAACAGCAGGTGCAGGAAAAAAGCGCCGGCGATGATGAGGCCCACGCCATGG ATGAAGACTATCTCCGCGCTTTGGAGTACGGCATGCCGCCAGCGGCCGGCCAAGGGGTGGGCATCGACCGTCTGGTCATG CTTTTGACGGACTCGGCTTCGATTCGTGAAGTTATCCTCTTTCCGTTGCTGCGGCCGGAAACCAAGACAGAATAA Protein sequence : MSKQKKDKAGTESQVIKNRWDKAQNFAEQGLALFGNTFRKDTDIQDLIQSYESLSAEDLENVEHTFALAGRIMAIRSFGK ATFMHIQDSTGKLQVFVQRDAVGADLYKLFKKFDVGDIVGVRGTLFRTRTDELTLKAEHVELVTKSMRPLPEKYHGLKDV ETRYRQRYVDLIVTPQARDIFVKRTRIVQGLRHFLDNRGFMEVETPMMQHIPGGATARPFVTHHNALDMELYLRIAPELY LKRLLVGGLERVYEINRNFRNEGISTQHNPEFTMLEFYWAYADVYDLMDLTEEMFAQLAQDVCGTTRITYQGQEIELGGR WNRLTFHQALEEIGGLEPQQYQDHDQAQALVQRLGENVQTGEQLGKTQAKLFDLLVEPKLIQPHFISHYPTDISPLSRRN EENPELTDRFELFICGREMANAFSELNDPFDQRQRFEQQVQEKSAGDDEAHAMDEDYLRALEYGMPPAAGQGVGIDRLVM LLTDSASIREVILFPLLRPETKTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-121 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dret_2234 | YP_003199096.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-121 | 51 |
