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Name : Dret_2225 (Dret_2225) Accession : YP_003199087.1 Strain : Desulfohalobium retbaense DSM 5692 Genome accession: NC_013223 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2526944 - 2528542 bp Length : 1599 bp Strand : + Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: pag:PLES_35201 putative ATP-binding component of ABC transporter DNA sequence : ATGACCGGTGTGCGGCGTATTGTCGAGATCAAAAACCTGTGCGTCTGGTTCCCGGGGGACCAGGAGCCGGCTGTCAACGG TGTGAGCTTGTCCTTGGAGGCCGGACAAACCCTGGGGCTGGTAGGCGAAAGCGGCTCCGGAAAATCCGTCACCGCCCTGG CCCTGATGGGCCTGCTGCCCCCGGCAGCCCGCTGCACGGCTGAAAGACTCGAGTTGAACGCTACCGATATCCTGCGCGCC AATGCCAAAACTGTGCGGGCTCTGCGCGGCAACTCCGCGGCCATGGTCTTTCAAGAGCCCTTGTCCGCTCTGAACCCGCT GCACACCATTGAACGGCAAATCACCGAACCGCTGCAATGGCATACGGGTCTTTCCGGAGCGAACGCCCGCAAGAAGGCGA TTGAGCTCCTGGAGATGGTCGAAATCAAGGAACCGGCGGCCAAACTCACGACCTATCCCCATCAACTCTCAGGGGGGCAG CGCCAGCGGGTCATGATCGCCATGGCCCTTTCCACATCCCCGCGGGTCCTTATTGCCGACGAACCAACGACCGCCCTGGA TGTCACCGTCCAGCGCCAGATTTTGGACCTGCTGCAGCGGTTGCAGCACAATTTCGATATGGCCTTGATGCTCATTTCCC ATGACCTGGCCATGATCAAGGACGTTACCGCTGACACCGCGGTCATGAAGCAGGGCCGCCTGGTCGAAAATCGGCCCACG GCTGAACTCTGGGCCGAGCCGCACCACCCGTACACCTCGGCTTTGATCAATGCCGAGCCACACGGGGCGCCGGTTCCCGC CCGTGCTACAGCCCCCGTACTTCTGGATGCCGCAGGACTCCGGGCCTGGTTCCCGATCAAAAAAGGAGTATTCAAACGGA CGGTGGGGCACGTCAAAGCCGTGGACGGGGTCGATCTCCGGGTGCGGCAGGGGCATGCTGTGGGGATTGTCGGGGAAAGC GGCTCGGGAAAAACGACGCTTGGCATGGCCCTGCTGCGTTTGGCCCACAGTCGCGGCCAGATTCTGTTCGACGGGCAGCG GATCGATTCGCTGCGCTCCTCCCAACTCCGCTTTTTGCGCCGCCGACTGCAAATCATCTTTCAAGATCCCTTCGGCAGCC TCAATCCACGGCTGGACACCACGGCCATCATTGCTGAAGGGCTTAAGGTCCATGAATCCCTCGGGGAATCGGACCGGATC CAGCGCGTGGTCCAAACCATGGAGTTGGTCGGCCTCGACCCCGCCTGGCGCCACCGCTATCCGCATGAATTTTCCGGTGG CCAACGTCAACGCCTCGCCATCGCCAGGGCGCTCATCCTCCGCCCCAGCCTTGTGGTCCTGGACGAGCCGACCTCTTCTC TGGACCGCTCCATCCAGTCCCAGATCCTGGTCTTGCTGCGGCGCCTCCAAAAAGAACTCGGTTTGAGCTATCTGTTTATC TCCCACGATCTCAAGCTGGTCCGCGCCCTGTGCCACGAAGTTCTGGTCATGCACGGCGGCAGTTGTGTGGAGCACGGGGC CACGGAGGCCGTGCTGTCCGAGCCCCAAGCCCCAAGCACACGGCGGCTGGTCAGCGCTGCCTTCGGCGAAGCCGGCTGA Protein sequence : MTGVRRIVEIKNLCVWFPGDQEPAVNGVSLSLEAGQTLGLVGESGSGKSVTALALMGLLPPAARCTAERLELNATDILRA NAKTVRALRGNSAAMVFQEPLSALNPLHTIERQITEPLQWHTGLSGANARKKAIELLEMVEIKEPAAKLTTYPHQLSGGQ RQRVMIAMALSTSPRVLIADEPTTALDVTVQRQILDLLQRLQHNFDMALMLISHDLAMIKDVTADTAVMKQGRLVENRPT AELWAEPHHPYTSALINAEPHGAPVPARATAPVLLDAAGLRAWFPIKKGVFKRTVGHVKAVDGVDLRVRQGHAVGIVGES GSGKTTLGMALLRLAHSRGQILFDGQRIDSLRSSQLRFLRRRLQIIFQDPFGSLNPRLDTTAIIAEGLKVHESLGESDRI QRVVQTMELVGLDPAWRHRYPHEFSGGQRQRLAIARALILRPSLVVLDEPTSSLDRSIQSQILVLLRRLQKELGLSYLFI SHDLKLVRALCHEVLVMHGGSCVEHGATEAVLSEPQAPSTRRLVSAAFGEAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-65 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-65 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 9e-65 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-65 | 41 |
