Gene Information

Name : Dret_2077 (Dret_2077)
Accession : YP_003198939.1
Strain : Desulfohalobium retbaense DSM 5692
Genome accession: NC_013223
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 2368294 - 2368833 bp
Length : 540 bp
Strand : -
Note : KEGG: dvm:DvMF_1450 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein

DNA sequence :
ATGACAGAAGAAAGCGCCCGTTGGTATATCGTCCATGCCTTCTCAGGTTATGAGCAACGCGTGGAGAAAACCATTGCTGA
AATGATCCGAAGTGGACAGGGCGAAGGGCTCATAGAGGAAGTGATCGTCCCTACTGAAAAAGTAGTGGAGATGGTCAAAG
GTCAGAAGAAAACGTCGACCCGCAAGTTTTATCCCGGCTATGTCCTGGTCAAGATGATCCTCAACGACAAGACCTGGCAC
CTGATCCAGTCGATCCCGAAAGTGACAGGGTTTGTCGGAGGACAGAAGCGGCCGAAGCCCTTGACGCAAAAGGAAGCGGA
CCAAATTCTGCAGACCATCGAGAGCCGCAAAGAGCAGCCGCGCCCGAAATTCCATTTCGAACGTGGCGATGAAGTTCGCG
TGATTGATGGGCCTTTTTCCGGCTTTAATGGGGAAGTAGAAGAGGTCAATTACGATAAGGGCAAGCTCAGGGTTTCGGTT
TCCATTTTCGGGCGGCAGACACCTGTTGAACTCGATTTTGTCCAGGTCTCCAAAGGGTAG

Protein sequence :
MTEESARWYIVHAFSGYEQRVEKTIAEMIRSGQGEGLIEEVIVPTEKVVEMVKGQKKTSTRKFYPGYVLVKMILNDKTWH
LIQSIPKVTGFVGGQKRPKPLTQKEADQILQTIESRKEQPRPKFHFERGDEVRVIDGPFSGFNGEVEEVNYDKGKLRVSV
SIFGRQTPVELDFVQVSKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 9e-45 53
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 9e-45 53