Gene Information

Name : Dret_1336 (Dret_1336)
Accession : YP_003198202.1
Strain : Desulfohalobium retbaense DSM 5692
Genome accession: NC_013223
Putative virulence/resistance : Unknown
Product : FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : -
Position : 1561491 - 1562837 bp
Length : 1347 bp
Strand : -
Note : PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: dma:DMR_34990 glutathione reductase

DNA sequence :
ATGCCAGAGCGATTTGATGTGATTGTCCTCGGCACGGGCCCGGCCGGGGGCGTTGTCGCCAAAGAGTGCGTAGCGGCCGG
TCTGTCCGTTGCCGCGATTGACAAGGGTGATTTTGGCGGCACCTGTCCCTTGCGGGGGTGCGAACCCAAAAAGGTCCTGG
TGGACGCGGCAGATGCCGTGGCCCGCGCCTCCAACATGCAGGGCAACGGAGTCACCGGAAACTTCGGTTTGGAATGGCCG
TCTCTGCACCGCTTCCAGCGCAGTTTTGTCGAGCCGATCCCGAAGGCCGTGCAACATTCGTTGCATAAAGCCGGGATAAC
CACTGTCCAGGGAGTACCGGTATTCACCGGGGCGAACACACTCAGTGTGGAAGGACGGCAATTCGAGGCCGAACACATTG
TCATCGCCACCGGGGCCCAGCCCCGGCAATTGCCGGTACCCGGCAACGACTTGGCGTTGACCAGCGATGATTTTTTCCAC
CTCTCCTCACTGCCGTCCCGGCTCGTCTTTGTAGGCGGCGGCTTTATCAGTTTTGAATTCGCCCATGTTGCCGCCCTGGC
TGGGGCCGAAGTGAGCATTGTCCACCGCAGTGAGCGGGTTTTACGCCCGTTTGACCCCGACTTGGTGGCTCGGGTCGAAG
AAGCCTCGCGGCAGGCGGGAATCCGGATATATAAAGACACGCCCGTCCACTCCCTGAGCGAGGACGGCTCTGAGGTGGTC
CTGACTGCGGGGCCGGAGGGCACACAGCGTTTTGTCGCGGACGCTGTCGTCAATGCCATCGGGCGGGTCCCTTCGATTGA
TGGGCTGGATTTAGAGAATGCCGGGATTGAGTGGAGCGAGCACGGCGTGCGGGTCAACGAATTCATGCAAAGTGTATCCA
ACCCCGCCATCTATGCGGCAGGAGATGTGGCAGAACCCGGCCAAGCCCTGACACCGGTGGCGGTCATGCACGCTGAAACC
GTGGTTCACAATATCTTGAACGGCCCGAGCAAAACAGCCGACCATAGCGGTACTGCTGCTACGCTCTTTACGTATCCGCC
CCTGGCCCGTGTGGGAATGCTCGAAAGCGAGGCCCGGGAAACCGATCCGGACTGTGTTGTCAAACACCGGCACAGCGAAA
ACTGGTCCGAGTACCAGCGTCTGGGTCAACAATACGCCGGCTACAAGATTGTCTTCAGTGGGGACCGGCAACGGGTGCTT
GGGGCCCATCTTCTTGGCGACGGCGCCGAAGAGGTCGCCAATGTGTTTGCCCTGGCCGTGCGCAAAGGGCTTTCCGTGGC
CTCTCTTCAGGATATGCTCTGGGCCTATCCCTCCTTTGGCTACACCCTGCGCCATATGCTGGGTTGA

Protein sequence :
MPERFDVIVLGTGPAGGVVAKECVAAGLSVAAIDKGDFGGTCPLRGCEPKKVLVDAADAVARASNMQGNGVTGNFGLEWP
SLHRFQRSFVEPIPKAVQHSLHKAGITTVQGVPVFTGANTLSVEGRQFEAEHIVIATGAQPRQLPVPGNDLALTSDDFFH
LSSLPSRLVFVGGGFISFEFAHVAALAGAEVSIVHRSERVLRPFDPDLVARVEEASRQAGIRIYKDTPVHSLSEDGSEVV
LTAGPEGTQRFVADAVVNAIGRVPSIDGLDLENAGIEWSEHGVRVNEFMQSVSNPAIYAAGDVAEPGQALTPVAVMHAET
VVHNILNGPSKTADHSGTAATLFTYPPLARVGMLESEARETDPDCVVKHRHSENWSEYQRLGQQYAGYKIVFSGDRQRVL
GAHLLGDGAEEVANVFALAVRKGLSVASLQDMLWAYPSFGYTLRHMLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
merR BAB47647.1 regulatory protein Not tested Type-III SCCmec Protein 8e-89 43
SE0080 NP_763635.1 regulatory protein Not tested SCCpbp4 Protein 1e-88 43