Gene Information

Name : Dret_1173 (Dret_1173)
Accession : YP_003198039.1
Strain : Desulfohalobium retbaense DSM 5692
Genome accession: NC_013223
Putative virulence/resistance : Virulence
Product : family 2 glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 1377088 - 1378047 bp
Length : 960 bp
Strand : +
Note : PFAM: glycosyl transferase family 2; KEGG: rpi:Rpic_0600 glycosyl transferase family 2

DNA sequence : 
ATGTTTCCAAAATGCGAACCTCACCAGCCCACTATGTTGTCAATCATCTGCCCATTGCGCGATGAGGAGGATTCGGTTCA
GCCCTTTTTTGCCCGCCTTTTGCCGGTGCTTAAGGACTTGGAGCTGGATTTTGAAATCATTTGCGTCAACGACGGCAGCC
AGGACAAAACATTGGAGCGCTTGCAGGCCGCTAGGGAGCTTGAGTCGAGAATCAGGATTCTTGATCTGTCTCGCAACTTC
GGTAAGGAAGCGGCCTTAACCTGCGGACTGGATCATACCCGAGGCCAGGCCGTGATCCCGATCGATGCAGACCTCCAGGA
TCCACCGGAATTGATCGTAGACATGGTCCACATGTGGCAGCAGGGTTGTGAAGTGGTCCTGGCTCAGCGAACGGATCGCT
CATCGGACAACTGGCTCAAGCGCAAAACCGCAGAGTGGTTCTATCGGTTACATAACGCCATTTCCCGACCGACCATCATC
CCCAATGTGGGCGATTTTCGCCTCATGGATCGCAAGGTTGTTGAGGCCCTGAAAATGTTGCCTGAGCGGGGGAGATTTAT
GAAAGGGATTTTTTCCTGGGTCGGATTTCGTCAGGCAATCCTCCCCTATGCTCGAGATGTGCGAAAAACAGGAAAAAGCA
AATTTTCCACTTGGCGGCTATGGAACTTTGCCATGGATGGTATCACCTCATTTTCCACAGTCCCCTTGCGAATTTGGACC
TATTTAGGGCTGGCCATAGCTTTGGCGTCCTTTGCTTATGGTTCGTTTATTGTCGGGCGGACCCTGATTTTTGGCCGTGA
TTTTCCGGGATATGCCTCCTTGATCACAGTCATTCTGTTTTTCGGTGGCGTGCAACTCATTGGTCTTGGTGTTGTTGGTG
AATATATCGGCCGGATCCATACGGAAACCAAGGCCCGCCCTATTTATGTTGTTCGAGAACGGTTTGAAGATGTGACGTAA

Protein sequence : 
MFPKCEPHQPTMLSIICPLRDEEDSVQPFFARLLPVLKDLELDFEIICVNDGSQDKTLERLQAARELESRIRILDLSRNF
GKEAALTCGLDHTRGQAVIPIDADLQDPPELIVDMVHMWQQGCEVVLAQRTDRSSDNWLKRKTAEWFYRLHNAISRPTII
PNVGDFRLMDRKVVEALKMLPERGRFMKGIFSWVGFRQAILPYARDVRKTGKSKFSTWRLWNFAMDGITSFSTVPLRIWT
YLGLAIALASFAYGSFIVGRTLIFGRDFPGYASLITVILFFGGVQLIGLGVVGEYIGRIHTETKARPIYVVRERFEDVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 4e-68 55
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 7e-67 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dret_1173 YP_003198039.1 family 2 glycosyl transferase VFG0670 Protein 2e-68 54