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Name : Dret_1072 (Dret_1072) Accession : YP_003197938.1 Strain : Desulfohalobium retbaense DSM 5692 Genome accession: NC_013223 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1263283 - 1264017 bp Length : 735 bp Strand : - Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : ATGCCGCCTCGTTGTATCGGAATCATCCCGGCCCGATACGCTTCCTCCCGCTTTCCGGGCAAACCCCTGGCCCCTGTCCT GGGGCGCCCCATGTTCTGGCATGTCTATACCCGGGCCTGCCGTTGCCCTGAATTGTCCCAGGTCGTCCTGGCCACGGATG ACGAGCGTATCGTGCACAGCGCTCAGAACGAAGGAGTTCCCGTGGTCATGACCCGTTCCGACCACCCCAGCGGGTCTGAT CGAGTCCTGGAGGCGGCCGAACATTTGGGGCTTGACGAAGAAGACATCCTGGTGAACATCCAGGGTGATGAACCGGCCTT GGACCCGTCCATGCTTTCCGATGTGGTCCGCCCTTTCACTCAATCGGCGGTCCGTGTCGGAACCCTGGTCCGAGCTATAG CGGAAACAGAGGCCCGGGATCCCAACGTGGTCAAAGCCGTGACCGCCCCGGACGGGCGAGCGTTATACTTTTCCCGGGCA CCGATTCCCTATCCCCGGGACAACGTGCCAGCGTATCTCGGTCATGTCGGCCTGTACGCCTACCGTCTGCTCAGCCTGAA ACATTTCAGCTCCCTGGGGCCCAGCGCCCTGGAACAAAAAGAACACCTGGAACAACTCCGTTTTCTGGAAGCCGGCATTC CGATCCATACGGTACAGACAGCCTGCCGCTGCCACGGCGTGGATTGCCCGGACGACATCAAGCGGGTGGAACGTATCTTG AAGGAGAGTCAATAA Protein sequence : MPPRCIGIIPARYASSRFPGKPLAPVLGRPMFWHVYTRACRCPELSQVVLATDDERIVHSAQNEGVPVVMTRSDHPSGSD RVLEAAEHLGLDEEDILVNIQGDEPALDPSMLSDVVRPFTQSAVRVGTLVRAIAETEARDPNVVKAVTAPDGRALYFSRA PIPYPRDNVPAYLGHVGLYAYRLLSLKHFSSLGPSALEQKEHLEQLRFLEAGIPIHTVQTACRCHGVDCPDDIKRVERIL KESQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 8e-41 | 44 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-40 | 44 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 6e-41 | 44 |
