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Name : RB2501_07110 (RB2501_07110) Accession : YP_003194429.1 Strain : Robiginitalea biformata HTCC2501 Genome accession: NC_013222 Putative virulence/resistance : Unknown Product : type I restriction-modification system DNA methylase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 837705 - 839300 bp Length : 1596 bp Strand : - Note : - DNA sequence : ATGACCCAAACCAAAGCCGACATCAACTTCGAAAAAGAACTCTGGAATGCAGCCAATGAACTCCGCGGAGCTGTAGCCGA AAATCAGTATAAGGATTATGTGCTTCCCCTAATCTTCTTGAAGCACATGTCGGAGCGTTATGAGATGCGCCGGGATGAGT TAATGGATGCTTTCGAGGATGAGGCCTCAAATTACTACGGGCTATCTGAGGACGATAGAAACTACGTTCTTGAAGACCCA GATGAATACCTCTCAAAGAACACCTACATCATTCCCAAAAAGGCAACCTGGGAGTTTTTACAAGATAATGCCGAGCGGGA TAACATCAAAGTCCTGGTGGACGAGGCTTTTGACACTCTGGATGAAACACTTGGTGCTTTCCGGCCTGAACTCAAAGGAA TTTTACCGCGGATTTTTGTGAAGAGCCAGCTCACCTCTCGGCAAGTGGGTGGACTCATTAATTTGCTTTCGCACCCTAAA TTGTCCGTAAAGGAAAATCCAGAGAGTGATATTCTTGGGCGCGTTTATGAATACTATATCGGGAAGTTTGCGATTGCTGA GGGATCCGGTGCGGGTCAGTTCTTCACTCCCGGCAGTATTGTTCGCTTGATGGTTGAAATGATAGAGCCTTACAAGGGTA AAATATTTGATGCTGCCTGTGGGTCCGGCGGAATGTTTGTGCAATCCCTTAAATTTCTAGAAGCGCACGGCGGAGACAAG CGTAATATTTCTATTTATGGCCAAGAACGATATAGTGGCACACTGAGACTGTGTAAAATGAATCTCGCCCTTCGTGATTT GTCCTTTGATGTCCGTTTGGGAGACTCTCTGCTGCAAGACAAATTTCCAGACTTAGAGGCTGACTATATCCTAGTGAATC CCCCATTCAACGTCAGCCAGTGGCATCCGGAGGATCTTCCGGATAAAGACCCTCGGCTCTTTGGACCTAAAGAAGAGTTT ACCACAGATGGCAATGCCAACTATATGTGGATGCAGACTTTTTGGAGTCACCTAAGCAATACGGGAACTGCCGCGGTGGT GATGGCTAATGGTGCCATGACTACCGGGAATAAAGGAGAAAAGAATGTGCGCCAACATATGGTGGATGAGGGAATGATTG ATGCAATTGTTCGCCTCCCAGACAAGCTCTTTCTTACTACCGGGATTCCAGCCTGTATTTTCATCCTGAGCAAAAACCGG GATGGCAAGGATGGGGTTCACAGGGAACGTAAAGAGGAGATTCTCTTTATCGATATGTCGAAGATGGGGCGAATGGAAAG CCGGCGACTGCGTGTGTTTGACGAGGCCGACCTAATAAAAGCAGTTGAGGCGTATCATGCCTGGAGAAATCTGCCTAATA AGGATAATGCTCCTTATGAAAACCAGGATGGTTTCTGCTATGCAGCTACCTTAGAAGAAGTTCAAAAACAGGATTATAAG CTTACTCCTGGTATTTATGTGGGGATAGAAGAAGAGGAGGATGACGGTATTCCGTTTGAGGAGAAGCTGGCCATTTTAAA AGCTCAATTAAAAGAGCAATTTCGTGAAGGTGAAGACTTGAAGAGGAAGATACTGGATAACTTTGATCAGTTTTAA Protein sequence : MTQTKADINFEKELWNAANELRGAVAENQYKDYVLPLIFLKHMSERYEMRRDELMDAFEDEASNYYGLSEDDRNYVLEDP DEYLSKNTYIIPKKATWEFLQDNAERDNIKVLVDEAFDTLDETLGAFRPELKGILPRIFVKSQLTSRQVGGLINLLSHPK LSVKENPESDILGRVYEYYIGKFAIAEGSGAGQFFTPGSIVRLMVEMIEPYKGKIFDAACGSGGMFVQSLKFLEAHGGDK RNISIYGQERYSGTLRLCKMNLALRDLSFDVRLGDSLLQDKFPDLEADYILVNPPFNVSQWHPEDLPDKDPRLFGPKEEF TTDGNANYMWMQTFWSHLSNTGTAAVVMANGAMTTGNKGEKNVRQHMVDEGMIDAIVRLPDKLFLTTGIPACIFILSKNR DGKDGVHRERKEEILFIDMSKMGRMESRRLRVFDEADLIKAVEAYHAWRNLPNKDNAPYENQDGFCYAATLEEVQKQDYK LTPGIYVGIEEEEDDGIPFEEKLAILKAQLKEQFREGEDLKRKILDNFDQF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 2e-98 | 44 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 7e-100 | 44 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 3e-99 | 43 |
