Gene Information

Name : RB2501_03535 (RB2501_03535)
Accession : YP_003193716.1
Strain : Robiginitalea biformata HTCC2501
Genome accession: NC_013222
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 56325 - 57029 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence : 
ATGATTGAAATCAAAGATTTACACAAGTCCTATAAGATGGGGAGCAATTCGCTCCACGTTCTCAAAGGGATCAATTTTAA
GGCGGAAGAAGGCGAACTGGTTGCGATCATGGGGTCTTCCGGCTCCGGGAAATCCACCCTGCTGAATATCCTGGGGATGC
TGGACGAGGCCGACGAGGGGGATTATATCCTCGACGGGGTCCCGATCAAGAACCTCAGTGAGACCAAGGCAGCCAAATAC
CGCAACAAGTTCCTCGGATTTATCTTCCAGTCGTTTAACCTGATCAATTATAAATCGGCCCTGGAAAACGTGGCCCTGCC
GCTCTACTACCAGAAAGTAGGCCGTAAGGAGCGCGAATCCAAGGCGCTGAAATACCTGGAGCAGGTTGGCCTGAAGGAAT
GGGCCCACCACCTGCCCAACGAATTGTCGGGCGGGCAGAAACAACGGGTGGCCATCGCCCGGGCCATGGCGGCCGAACCC
AAGGTGCTCCTGGCCGATGAGCCAACCGGCGCCCTGGACAGCACCACCTCCTACGAGGTGATGGACCTGATCCAGCATAT
CAATGACCAGGGGAATACCATCCTGGTGGTTACCCACGAGGAGGACATTGCCCATATGTGCAAACGGATCATCCACCTCC
GGGACGGCATCATTGTCGAAGACAAGAAGATTGAGCAGGTAAGAGCTTCGCAGTATGTTCAATAG

Protein sequence : 
MIEIKDLHKSYKMGSNSLHVLKGINFKAEEGELVAIMGSSGSGKSTLLNILGMLDEADEGDYILDGVPIKNLSETKAAKY
RNKFLGFIFQSFNLINYKSALENVALPLYYQKVGRKERESKALKYLEQVGLKEWAHHLPNELSGGQKQRVAIARAMAAEP
KVLLADEPTGALDSTTSYEVMDLIQHINDQGNTILVVTHEEDIAHMCKRIIHLRDGIIVEDKKIEQVRASQYVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RB2501_03535 YP_003193716.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-53 53
RB2501_03535 YP_003193716.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-40 45
RB2501_03535 YP_003193716.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-38 43
RB2501_03535 YP_003193716.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-35 42