Gene Information

Name : RB2501_05345 (RB2501_05345)
Accession : YP_003194076.1
Strain : Robiginitalea biformata HTCC2501
Genome accession: NC_013222
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 451669 - 451863 bp
Length : 195 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAACACCATCCGCGTCCTTCGCGCCGAAAAGAACTGGACCCAGGAACAGCTTGCAAGTGCCATCGGGGTATCCCG
GCAGACCATCAACGCCATCGAGAAAGAGAAGTTCGACCCGAGCCTCCCGACCGCTTTTCGCATCGCCCGGTTGTTCGAAA
AGCCCATCGAAGCGATATTCACCTTCGAAGAATAA

Protein sequence :
MKNTIRVLRAEKNWTQEQLASAIGVSRQTINAIEKEKFDPSLPTAFRIARLFEKPIEAIFTFEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-11 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-08 47
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-08 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RB2501_05345 YP_003194076.1 DNA-binding protein VFG2175 Protein 2e-08 47
RB2501_05345 YP_003194076.1 DNA-binding protein VFG2168 Protein 2e-08 47