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Name : RB2501_04890 (RB2501_04890) Accession : YP_003193985.1 Strain : Robiginitalea biformata HTCC2501 Genome accession: NC_013222 Putative virulence/resistance : Unknown Product : regulatory protein Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 355509 - 356855 bp Length : 1347 bp Strand : - Note : - DNA sequence : ATGAAAAAATATGATGTTTTCATTATTGGCTCGGGTATGTCCGGTATGACAATCGCCTATAAATGTGCCTCAAAAGGTCT TTCGGTGGGCATTACTGATGAACTGCCTTATGGTGGCACCTGCGCCCTACGAGGCTGTGACCCAAAAAAAGTAATTATCG GTGCCACGGAAGTACGTGACTTTGCCAAACGGCTTCAAGGGAAAGGCATTGATACCATTCCGGATATCAACTGGAAGGAT ATAATGGCGTTCAAACAGACCTTTGTCGATGAAATGCCAAGGAAAATAGAAAAGGGGTATAAGAAGAACGGCATCGATAC CTTTCACAGTTCCGCTGCGTTTATAAATGAAAATACCTTAAGTGTAGGTAACCAGACCATCCAAGCTGATAATGTTGTAA TTGCATCCGGTTCAAAACCAAAAGTTTTAGACTTTGAAGGCGGACAGCTTGCGCAAACGAGTACGGATTTTCTAAACCTT AAGGAATTGCCAGAATCCCTGCTTTTCATCGGTGGTGGATATATAGCTTTTGAATTCGCCCATATTGCGGCACGTTCCGG TGCCGAGGTAACGATAGTACACCGGGGGAAACGTCCGCTAGAAAACTTTGACAAGGATATTGTAAAACATTTGGTTGATG CCACAATTAATTTAGGAGTTAGGCTTGTTCTTGAAACCGAAGTTTCTAAAATTGAAAGTGAAGATGGTCACTTTGTAACC ACAGGAATTTCTGAAGGAATGGAAACTACCTACAAATCGAAAGCAGTATTTAATTCCGCGGGTCGTCCGCCTGCCATTTT TGATTTAGAATTGGAAAAAGCAGGTATATCCTTCTCAAAAAAGGGGATAGCGGTCAACGAATACCTTCAGAGCATATCGA ACGCGAACATATATGCAGCTGGTGATGCAGCGGACTCAAGAGGATTGCCCTTAACACCCGTAGCTGTTTTGGAAGGACAC GTCGTAGCTTCAAATATCATTAAAGGAAATAAGAAAAAAGTCAGTTATCCCCCAATGCCTTCCGTGGTTTTCACTTTGCC CACAATGGCAACGGTTGGCCTATTGGAAGATAAGGCCAAGGAAAAAGGTTTTGATATCAACGTCAATTTTGAAAAAGTGG GTAATTGGTTTAATGCGAGACGCCTGAATGTGGATGAATATGCTTTTAAAACAATCATCGATAAAAATAGTAACACTATT TTGGGCGCGCATCTGATCGGGCCTCACTGCGAAGAAACAATAAATCTTTTTGCCATGGCGATAAAGACCAAGATGACCAT CAGTGATTTGCGGACAATGATATTTTCATATCCTACAATGGTATCTGACCTAACCTATATGCTCTAA Protein sequence : MKKYDVFIIGSGMSGMTIAYKCASKGLSVGITDELPYGGTCALRGCDPKKVIIGATEVRDFAKRLQGKGIDTIPDINWKD IMAFKQTFVDEMPRKIEKGYKKNGIDTFHSSAAFINENTLSVGNQTIQADNVVIASGSKPKVLDFEGGQLAQTSTDFLNL KELPESLLFIGGGYIAFEFAHIAARSGAEVTIVHRGKRPLENFDKDIVKHLVDATINLGVRLVLETEVSKIESEDGHFVT TGISEGMETTYKSKAVFNSAGRPPAIFDLELEKAGISFSKKGIAVNEYLQSISNANIYAAGDAADSRGLPLTPVAVLEGH VVASNIIKGNKKKVSYPPMPSVVFTLPTMATVGLLEDKAKEKGFDINVNFEKVGNWFNARRLNVDEYAFKTIIDKNSNTI LGAHLIGPHCEETINLFAMAIKTKMTISDLRTMIFSYPTMVSDLTYML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 6e-108 | 49 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 9e-108 | 49 |
