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Name : RB2501_04855 (RB2501_04855) Accession : YP_003193978.1 Strain : Robiginitalea biformata HTCC2501 Genome accession: NC_013222 Putative virulence/resistance : Resistance Product : copper-transporting ATPase, P-type (copB) Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 348154 - 350310 bp Length : 2157 bp Strand : + Note : - DNA sequence : ATGGAAAATCACGAGCATCACAAACACGATCATAGTAAAAGAAGTAAGGGTTCCGCAAAGGAAAAGGCAGTGGATAAAAA GACCGAATTGAAAGATTCACTGGCCGAAAAAACCGAGCATGGCCATACCAAAACCATGGATAAGGAACACAATATGAGCC ATGATGAACATTCCGACCATAATCCGAAACATGGGCAGATGGGTCATGACCACCATAAGATGATGATCGCTGACTTTAGA AAACGTTTTTGGGTAACCTTGGTACTGACCATACCCATTCTATTTCTGTCGCCGATGATCCAAGAATTTTTCGGCTATGA TTTTTTGTTGCCGGGCAACCCGTACATTCTATTCGCAATATCGTCCATAGTTTATTTCTATGGTGGCTGGCCTTTTTTAA AGGGATTCTGGTCTGAGGTGAAAAAAGGTGCCCCGGGAATGATGACCCTGATTGCCATGGCCATAAGTGTGGCCTATTTT TATAGTTCGGCTACCGTTTTTGGCCTTGAAGGTGTTGATTTCTTCTGGGAACTGGCTACCCTTATAGCCATTATGCTTGT AGGCCACTGGATAGAGATGAAGAGTGTTCTGGGAGCCTCAAAAGCCCTGCAATTATTGGTAAGTATGATGCCCGCCGAAG CACACCGCGTAAATGGCGAAACAATAGAAGATATAGCACTGGAAGATTTATTGAAAGGTGATTTGATCCTGATAAAACCA GGAGAGAAAGTTCCTGCGGACGGTATTGTCGTGGAAGGATCGAGTTACTTGAACGAATCAATGCTTACGGGGGAATCTAA ACCTGTAAAAAAAGAACTAAACGACAAAGTGATAGGTGGTTCGGTAAACGGAAACAGTAGTTTAAAGGTCAAGGTAGAAC ATACTGGTAAGGATAGTTATCTCAATAAAGTGATAACCATGGTCGAGGAAGCCCAAAAAACAAAATCCAAAATGCAGAAC CTTTCAGATAGGGCTGCCAAATGGCTTACCTATATTGCATTGGCCATTGGTTTTGGCACATTGGCTGTTTGGCTTGCATT GGGATTCCCCTTTGTATATGCCTTGGAACGAATGGTCACGGTTATGGTCATTGCCTGTCCCCACGCATTGGGTCTTGCCA TTCCATTGGTAGTAGCCATTTCCACAGCAGTTTCGGCACAGAACGGGTTGTTGATCCGCAACAGGACGGCATTTGAAGAA TCCCGAAAAATATCCGCTCTGCTTTTCGACAAGACCGGAACGCTGACCAAAGGGGATTTTGGTGTTACCCGTATAGAGTC GGTAGACAATAACAATTCCTCGGCCGAAGTATTACGGCTCGCCAGTGCTTTGGAACAAAGTTCCGAACACCCTATTGCAG TTGGCATCATCAAAAAAATCAAGGAGGATAAGGTAATCATCCCAAAACCTAAAAATTTTAATTCTATAACCGGAAAAGGT GTTGAAGCCACTGTTGAGAACAAAAAGATAAAAGTGGTAAGCCCTGGTTATTTAAGGGATGAAAAAATAGATATTCCAAA AGATGCCTATAGTGATGCTGCTGAAACAGTTGTATTTGTTTTAATCGATGGGAAGTTGGCAGGATACATTGCACTTGCCG ATGAGATCAGACCGGAATCCGCCGAAGCGATCAGGATTTTCAAAAAGAACAATATTAAAGTGCTCATGGCAACAGGAGAC AATGAAAAGACAGCAAAGGCGGTGAGCGAAAAATTAGGACTTGACGGGTATTATGCCGAAGTTTTGCCACACCAAAAGGT TGAAATCGTAAAGCAATTACAGGAAAAGGAGGAATTTGTAGCAATGACCGGCGATGGGGTTAACGATGCCCCTGCACTGG CACAGGCCAATGTTGGCATTGCAGTCGGTTCAGGTACCGATGTAGCCGCAGAGACAGCAGATATTATTTTAGTAAACAGC AATCCACAAGACATCGCTAACCTGATTTTGTTTGGGAAGGCCACCTATAACAAGATGATCCAGAACCTGATATGGGCTAC CGGTTATAATGTTGTCGCAATACCCCTTGCCGCAGGAGTCCTATACGCTTCGGGATTTGTCCTTGGTCCGGCCGTAGGAG CCGTATTTATGAGCTTGTCAACCATCATTGTCGCCATAAACGCCCAATTACTAAAAAGGAAAATTGCGAAGAAATAG Protein sequence : MENHEHHKHDHSKRSKGSAKEKAVDKKTELKDSLAEKTEHGHTKTMDKEHNMSHDEHSDHNPKHGQMGHDHHKMMIADFR KRFWVTLVLTIPILFLSPMIQEFFGYDFLLPGNPYILFAISSIVYFYGGWPFLKGFWSEVKKGAPGMMTLIAMAISVAYF YSSATVFGLEGVDFFWELATLIAIMLVGHWIEMKSVLGASKALQLLVSMMPAEAHRVNGETIEDIALEDLLKGDLILIKP GEKVPADGIVVEGSSYLNESMLTGESKPVKKELNDKVIGGSVNGNSSLKVKVEHTGKDSYLNKVITMVEEAQKTKSKMQN LSDRAAKWLTYIALAIGFGTLAVWLALGFPFVYALERMVTVMVIACPHALGLAIPLVVAISTAVSAQNGLLIRNRTAFEE SRKISALLFDKTGTLTKGDFGVTRIESVDNNNSSAEVLRLASALEQSSEHPIAVGIIKKIKEDKVIIPKPKNFNSITGKG VEATVENKKIKVVSPGYLRDEKIDIPKDAYSDAAETVVFVLIDGKLAGYIALADEIRPESAEAIRIFKKNNIKVLMATGD NEKTAKAVSEKLGLDGYYAEVLPHQKVEIVKQLQEKEEFVAMTGDGVNDAPALAQANVGIAVGSGTDVAAETADIILVNS NPQDIANLILFGKATYNKMIQNLIWATGYNVVAIPLAAGVLYASGFVLGPAVGAVFMSLSTIIVAINAQLLKRKIAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-94 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RB2501_04855 | YP_003193978.1 | copper-transporting ATPase, P-type (copB) | BAC0629 | Protein | 0.0 | 60 |
| RB2501_04855 | YP_003193978.1 | copper-transporting ATPase, P-type (copB) | BAC0079 | Protein | 2e-145 | 46 |
| RB2501_04855 | YP_003193978.1 | copper-transporting ATPase, P-type (copB) | BAC0383 | Protein | 8e-117 | 41 |
