Gene Information

Name : RB2501_00521 (RB2501_00521)
Accession : YP_003196328.1
Strain : Robiginitalea biformata HTCC2501
Genome accession: NC_013222
Putative virulence/resistance : Resistance
Product : ABC transport system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2917894 - 2918577 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence :

ATGATCAAAGTTGAAGAATTAGAGAAATTTTACAGTACCGAGGAGGTACGGACCATCGCCCTGAACAGACTGTCGTTTGA
GGTGAAGGAAGGCGAATTCGTAGCCGTCATGGGCCCCTCGGGCTGTGGCAAGTCTACCCTGCTGAACATCCTGGGCCTGC
TGGACGACCCGGACGGGGGGAGCTTCCAGTTCAACGGGATTGAGGTATCCGGGTTTAACGAACGCAAACGGGCCAACCTG
CGCAAACACAATATCGGCTTCGTCTTCCAGAGTTTTAACCTGATCGACGAACTTACCGTCTTTGAAAACGTGGAACTGCC
GCTGATCTATACGGGAGTGAAGGCCGCCGACCGGAAAGCGCGCGTGGAACAGGTGCTGGAAAAGATGCAGATCATGCATC
GTCGGCGCCATTTCCCCCAGCAGCTCTCAGGCGGGCAGCAGCAGCGCGTGGCCGTGGCCCGGGCCGTGGTGAACAACCCG
AAGCTCATCCTTGCGGATGAGCCCACCGGGAACCTGGACAGTTCCAACGGGAACGAGGTGATGGACCTGCTCACGGAGCT
CAACGAGCAAGGCACCACCATTATCATGGTCACCCACAGCGAGCACGACGCCAAGTACAGCCACCGGATTATCCGGATGC
TGGACGGGCAGAAGGTGACCGAAAATGTACTGGCAACCTATTGA

Protein sequence :

MIKVEELEKFYSTEEVRTIALNRLSFEVKEGEFVAVMGPSGCGKSTLLNILGLLDDPDGGSFQFNGIEVSGFNERKRANL
RKHNIGFVFQSFNLIDELTVFENVELPLIYTGVKAADRKARVEQVLEKMQIMHRRRHFPQQLSGGQQQRVAVARAVVNNP
KLILADEPTGNLDSSNGNEVMDLLTELNEQGTTIIMVTHSEHDAKYSHRIIRMLDGQKVTENVLATY

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Spaf_1862	YP_006310627.1	amino acid ABC transporter ATP-binding protein	Not tested	FWisland_2	Protein	5e-29	41
cur_1502	YP_001800896.1	cell division ATP-binding protein FtsE	Not tested	Not named	Protein	6e-30	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
RB2501_00521	YP_003196328.1	ABC transport system, ATP-binding protein	NC_012469.1.7686878.	Protein	3e-46	50
RB2501_00521	YP_003196328.1	ABC transport system, ATP-binding protein	NC_008702.1.4606598.	Protein	2e-36	48
RB2501_00521	YP_003196328.1	ABC transport system, ATP-binding protein	CP001581.1.gene798.p	Protein	2e-31	46
RB2501_00521	YP_003196328.1	ABC transport system, ATP-binding protein	CP001581.1.gene598.p	Protein	2e-30	42
RB2501_00521	YP_003196328.1	ABC transport system, ATP-binding protein	NC_012469.1.7686946.	Protein	3e-25	41
RB2501_00521	YP_003196328.1	ABC transport system, ATP-binding protein	NC_012469.1.7685735.	Protein	3e-32	41