Gene Information

Name : rplS (RB2501_16154)
Accession : YP_003196218.1
Strain : Robiginitalea biformata HTCC2501
Genome accession: NC_013222
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 2791967 - 2792317 bp
Length : 351 bp
Strand : +
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGGAATCTTTAGTAAGCTTTGTCGAAAACGAATTTGTGGCCCGGAAGGAATTCCCGAAATTTTCCGCCGGCGACACGAT
CACCGTATACTACGAAATTAAGGAAGGTGAAAAAACGCGTACCCAGTTTTTCCGGGGCGTCGTTATCCAGCGCCGCGGCA
GCGGGGCAACGGAGACCTTTACCATCCGCAAGATGAGCGGCACGGTTGGCGTTGAGCGGATCTTCCCGATCAATATGCCT
GCCCTGCAAAAAATCGAAATCAACAAACGCGGGAAAGTTCGCCGGGCGCGGATTTTCTACTTCCGCGGACTTACCGGGAA
AAAAGCCCGGATCAAAGAAGTACGTTCCTGA

Protein sequence :
MESLVSFVENEFVARKEFPKFSAGDTITVYYEIKEGEKTRTQFFRGVVIQRRGSGATETFTIRKMSGTVGVERIFPINMP
ALQKIEINKRGKVRRARIFYFRGLTGKKARIKEVRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 3e-25 55
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 4e-17 42