Name : rplS (RB2501_16154) Accession : YP_003196218.1 Strain : Robiginitalea biformata HTCC2501 Genome accession: NC_013222 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 2791967 - 2792317 bp Length : 351 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGGAATCTTTAGTAAGCTTTGTCGAAAACGAATTTGTGGCCCGGAAGGAATTCCCGAAATTTTCCGCCGGCGACACGAT CACCGTATACTACGAAATTAAGGAAGGTGAAAAAACGCGTACCCAGTTTTTCCGGGGCGTCGTTATCCAGCGCCGCGGCA GCGGGGCAACGGAGACCTTTACCATCCGCAAGATGAGCGGCACGGTTGGCGTTGAGCGGATCTTCCCGATCAATATGCCT GCCCTGCAAAAAATCGAAATCAACAAACGCGGGAAAGTTCGCCGGGCGCGGATTTTCTACTTCCGCGGACTTACCGGGAA AAAAGCCCGGATCAAAGAAGTACGTTCCTGA Protein sequence : MESLVSFVENEFVARKEFPKFSAGDTITVYYEIKEGEKTRTQFFRGVVIQRRGSGATETFTIRKMSGTVGVERIFPINMP ALQKIEINKRGKVRRARIFYFRGLTGKKARIKEVRS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-25 | 55 |
rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 4e-17 | 42 |