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Name : RB2501_04540 (RB2501_04540) Accession : YP_003193917.1 Strain : Robiginitalea biformata HTCC2501 Genome accession: NC_013222 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 287177 - 288502 bp Length : 1326 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGATTACCACCGGAGACAAAGAATACTTCAAAAATATCGGGAAGATCCCATTCGAAGGCAAGGAGTCCGACAATCCCCT GGCCTTTAAATACTACGACGAAAACCAAAAAGTCGGCGACAAGACCATGAAGGAACACTTCCGGTTTGCGGTTTGCTACT GGCATACGTTCACCGGGCTCGGGGCCGATCCATTCGGGGCGCCCACCCAACAATTCCCATGGCTCGAAAATTCAGACCCC GTGCAGCAGGCCAAGGACAAAATGGACGCGGCCTTTGAGTTTATCACCAAGATTGGCGCGCCCTATTACTGTTTTCACGA CTACGACCTGATCGCCGAGGGGCCCACCCTGGCCGAATCGGAACGTCGCCTGGACATCATCACGGACTACGCCCGGGAAA AGATGGACGCCTCCGGGGTAAAGTTGCTCTGGGGCACTGCCAATTGCTTCGGCAACCCGCGGTACATGAACGGGGCCGCC ACGAACCCGGATTTCAAAGTACTGGCCGCAGCCGGGGCCCAGGTTAAAAACGCCCTGGACGCCACCATCAAACTGGATGG GGAAAATTACGTGTTCTGGGGGGGACGCGAAGGCTATATGTCCCTGCTCAATACGGACATGAAACGGGAACAGGACCACA TGGCCAGGTTCCTGCATATGGCCCGCGACTATGCCCGGAAGCAGGGCTTTAAAGGGGTCTTCTTTATCGAGCCGAAGCCC ATGGAGCCCACCAAACACCAGTACGATTTTGACTCAGCCACCGTCCTGGCCTTTTTGAGCAAGTACGACCTGCTGGACGA CTTTAAGCTGAATATCGAAGTGAACCACGCCACCCTGGCGCAGCACACCTTTGAGCACGAATTGCAGGTGGCAGCGGACA ACGGCCTGCTGGGCAGTATCGATGCCAATCGGGGCGATTACCAGAACGGCTGGGACACCGACCAGTTCCCGGTAGATGTG TACGAACTTACCCAGGCGATGCTCGTGATCCTCGAAGCCGGGGGCTTCCAGGGAGGAGGCGTGAATTTCGACGCCAAGAT CCGCAGGAATTCCACAGACCTGGAAGACATCTTCTATGCCCACATCGGCGGGATGGATGCGTTTGCAAGGGCGCTGCTGG CCGCGCATGCGGTGCGGACCCAATCGGACTTCCTGAAAATGCGGAAGGATCGCTACGCGTCCTTTGACAGCGGGAAGGGT GCCGAATTCGAAGCGGGCAAACTGTCGCTGGAGGATCTCCACAAATTTGCAGGAGCGAACCAGGAGATCCCGCGGACGAG CGGCCGGCAGGAACTCTACGAAAACATTATCAACCAATTTATCTGA Protein sequence : MITTGDKEYFKNIGKIPFEGKESDNPLAFKYYDENQKVGDKTMKEHFRFAVCYWHTFTGLGADPFGAPTQQFPWLENSDP VQQAKDKMDAAFEFITKIGAPYYCFHDYDLIAEGPTLAESERRLDIITDYAREKMDASGVKLLWGTANCFGNPRYMNGAA TNPDFKVLAAAGAQVKNALDATIKLDGENYVFWGGREGYMSLLNTDMKREQDHMARFLHMARDYARKQGFKGVFFIEPKP MEPTKHQYDFDSATVLAFLSKYDLLDDFKLNIEVNHATLAQHTFEHELQVAADNGLLGSIDANRGDYQNGWDTDQFPVDV YELTQAMLVILEAGGFQGGGVNFDAKIRRNSTDLEDIFYAHIGGMDAFARALLAAHAVRTQSDFLKMRKDRYASFDSGKG AEFEAGKLSLEDLHKFAGANQEIPRTSGRQELYENIINQFI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 1e-101 | 54 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-101 | 54 |
