Gene Information

Name : RB2501_13784 (RB2501_13784)
Accession : YP_003195746.1
Strain : Robiginitalea biformata HTCC2501
Genome accession: NC_013222
Putative virulence/resistance : Unknown
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 2308542 - 2309732 bp
Length : 1191 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAAGCGCAAAGCCGGACTGAACACCACCTGCACCCATGTTGGGGCTGTTCCGGACGAACAATTCCAGGGGGCGGT
TTCCCCCCTCTATATGAGCACCTCCTATGCCTATGAACACGTGGATGTCAAGCGATATCCCCGCTACTTCAACACCCCGA
ACCAGGAGGCCCTGTGCCGGAAGATCGCGGCCCTGGAACACACGGAGGCTGCGCTGATCTTTGGCAGCGGGATGGCGGCG
GTGAGTACGTCGCTGCTGGCATTCCTCAACCACGGGGACCACGTGGTGCTTTCCCAGCAATCCTACGGGGGGACCCACAG
CCTGATCAAAGAGGAATTCGGCAAGTACGGAATCGACTTTACCTTTGTGGAAGGGACCGGGGTGGCGGACTTCGAGGCAG
CTATCCGCCCGGAAACACGCGTGCTTTACCTGGAAACGCCTTCCAACCCGCTTTTGCTGATTACCGATCTGGAGGCCGTG
TCCAAACTGGCTGCAGACCGCGGGCTCACTACGCTTATAGACAATACATTTGCCAGCCCGGTAAACCAGAACCCGGCAGA
TTTTGGCATCGACGTGGTCATCCATTCCGCCACAAAATACATGGGCGGGCACTCCGATATCTGTGCCGGGGCCGTTGCGG
CTTCCCGGGAACACATCGACCGGATCTTCCAACTGGCCAAGAACCTCGGGGGGAGCCTGAGCGACCAGACAACATGGATG
CTGGAGCGCAGTTTAAAAACCCTGGGACTGCGGGTAAAGGCCCAGAGCGAGAACGCTTTGCGCCTGGCCCGCCACCTGCA
GGACCACCCGGATGTTTCTTCGGTGTATTACCCGGGGCTTGAATCCCATCCGGGCCATGCGATTGCCCGGGCTCAGATGC
ACGGGTTTGGCGGTATGTTATCCTTTGAGCTTGCCCCGGGAATCCCCCTGGAAGGATTTGTCCGCGCATTGAAGTGGGTT
CGGCCCTCTATGAGCCTGGCCGGGGTGGAAAGTACGCTGACCATTCCTACCCTTACATCCCATGCCCTCTTGTCGGAGGC
CGATAGGCAGCGCGCGGGCATTCGCCCGAACCTGATCCGTTTCTCCGCGGGTATTGAGGATTTTGAAGATTTGTCCGCCG
ACCTGGACCAGGCCATTGCCAGCGCCCGGAAGCAGGCAGGCGTAACCCCTCAAAAAGAAGGCGCCGTATGA

Protein sequence :
MSKRKAGLNTTCTHVGAVPDEQFQGAVSPLYMSTSYAYEHVDVKRYPRYFNTPNQEALCRKIAALEHTEAALIFGSGMAA
VSTSLLAFLNHGDHVVLSQQSYGGTHSLIKEEFGKYGIDFTFVEGTGVADFEAAIRPETRVLYLETPSNPLLLITDLEAV
SKLAADRGLTTLIDNTFASPVNQNPADFGIDVVIHSATKYMGGHSDICAGAVAASREHIDRIFQLAKNLGGSLSDQTTWM
LERSLKTLGLRVKAQSENALRLARHLQDHPDVSSVYYPGLESHPGHAIARAQMHGFGGMLSFELAPGIPLEGFVRALKWV
RPSMSLAGVESTLTIPTLTSHALLSEADRQRAGIRPNLIRFSAGIEDFEDLSADLDQAIASARKQAGVTPQKEGAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-56 41