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Name : RB2501_13474 (RB2501_13474) Accession : YP_003195684.1 Strain : Robiginitalea biformata HTCC2501 Genome accession: NC_013222 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2231865 - 2233856 bp Length : 1992 bp Strand : + Note : - DNA sequence : ATGATTCAAAATTACCTGACAAATTCTGTTTCCCGTTACGCCTCCAAGTGGCTTGTACTGGCAATAGACCTCGTCACGGT GTCCGTTGCATTCGTCTTTTCCTACCTGATACGATTCAACCTCACCCTGAACTTCGACGTGGAAAAATTGTTCCTGCAAT TGCCCGTTATCGCATTTATCTCGATGGTGGCTTTCCTGATCACGGGATCCTACAAAGGGGTGGTACGGCATACGGGCGTC CGGGACGTTTACAATATTTTTAACGCCATCTGCCTTTCGAGCATCCTCTCGATCGTTTTGGTGCTGACCAACCGGCAGAT GCTGCTGATGGACGGGTTTACCATCCCGCTTTCCATTATCATCATCCACAGCTTGCTGGCCTTTATCGGCCTGACGGCTT CGCGTTACGTTTTCAAGGTATTCTATACCAACCTGATCAACCGGGGCATCAACTTCTCCAAGAATGTTTTTATCTACGGG GCCGGCGAATCGGGTATCCTTACTTACAACGCTCTGAATTCCATATCCCGGAGCAACGTCCGGGTCCTCGGGTATATTGA TGACGACCGGCAAAAGTCCGGGAAACAAATCAACGGGGTCCGCGTATACGGGCCGGAGATCCTGAACCGGGAATTCCTCA GGAAAAAGAATGTCTCCGAGATTATTTTTGCCATCCAGAATATCGACCAGAAAAAACTCAGGAAACTGGTGGAAAGCCTG GTGGAGTACTCCGTGCAGGTGAAAATCGTCCCCCCGGTCGAAGACTGGATCAACGGGGAACTGAAGGCCTCACAGATCAA ACAGATCCAGATTGAGGACTTGCTGGACCGGGCACCGATATCCATTAAGAATGCCAAGATTTCCAAAGAACTGAACGGCA AAAGCATCCTGGTAACCGGGGGTGCCGGTTCCATCGGCAGTGAAATCGTCCGGCAGATTTGCAATTACGACTACAAGACG CTGATTGTCCTGGACCAGGCGGAATCCGCCCTCTACGACCTGCAGCAGGAACTCAAACAGAACGGCTTCCACAACTTTAT CCCAATTGTGGCGGACGTCCGCGATAAAAACCGGGCAAATTCCATCTTCCAGGAGTACAAGCCCGACATCGTTTTCCACG CCGCGGCATACAAGCACGTGCCGCTGATGGAGTACAACCCCTATGAGGCCATCAAGATCAATATTGCCGGTACCAAGGTC ATTGCAGACCTGGCCCAGCAACACAATACCGATAAATTCGTCTTTATTTCCACGGACAAGGCGGTCAATCCCACCAACGT GATGGGTGCCTCCAAGCGGATTGCCGAGATGTATATCAGCTGTATCCAGCAGGAAGGGGGGACCAAGTACATTACAACCC GCTTTGGGAACGTATTGGGATCCAATGGCTCGGTGATTCCGCTCTTTAAGAAACAGATCGAGAAAGGCGGCCCGCTGACA GTCACCCACAAAGAAATTACCCGATATTTCATGACCATCCCCGAGGCTTCCCAACTGGTACTCGAGGCTGGGGCCATGGG CGAAGGTGGGGAGATTTTCATCTTCGATATGGGGGAATCGGTAAAGATATTCGACCTGGCCAAAAACATGATCCGCCTCT CCGGCCTCCGCTACCCGGAGGATATCGACATCAAGATCACCGGGCTCCGACCCGGGGAAAAGCTCTATGAGGAGCTTCTG GCAAACGGGGAGAATACGCTCCCTACCTATAACCGGAAGATCATGATCAGCAAGGTGCGCGAACTGGATTACGCAAAAGT GCGCTCCCTCATCGACGAACTATGCATCTCCAATATGTTCTTCAGCGGGGATACGGTAAAGCTTATGAAAAACATCGTGC CCGAGTACGTGTCCAATAATTCGGAGTTTTGTAAATTCGACCGGTCCCACCCGGAGGAGCCCATCGAATCGCGGGAGGAC CAGCTCAATACGGAGCGGCTTTCCATTCTGGAGGACCTGCTCCCTTCAAAACATAATCCGTCCAAGCAATGA Protein sequence : MIQNYLTNSVSRYASKWLVLAIDLVTVSVAFVFSYLIRFNLTLNFDVEKLFLQLPVIAFISMVAFLITGSYKGVVRHTGV RDVYNIFNAICLSSILSIVLVLTNRQMLLMDGFTIPLSIIIIHSLLAFIGLTASRYVFKVFYTNLINRGINFSKNVFIYG AGESGILTYNALNSISRSNVRVLGYIDDDRQKSGKQINGVRVYGPEILNREFLRKKNVSEIIFAIQNIDQKKLRKLVESL VEYSVQVKIVPPVEDWINGELKASQIKQIQIEDLLDRAPISIKNAKISKELNGKSILVTGGAGSIGSEIVRQICNYDYKT LIVLDQAESALYDLQQELKQNGFHNFIPIVADVRDKNRANSIFQEYKPDIVFHAAAYKHVPLMEYNPYEAIKINIAGTKV IADLAQQHNTDKFVFISTDKAVNPTNVMGASKRIAEMYISCIQQEGGTKYITTRFGNVLGSNGSVIPLFKKQIEKGGPLT VTHKEITRYFMTIPEASQLVLEAGAMGEGGEIFIFDMGESVKIFDLAKNMIRLSGLRYPEDIDIKITGLRPGEKLYEELL ANGENTLPTYNRKIMISKVRELDYAKVRSLIDELCISNMFFSGDTVKLMKNIVPEYVSNNSEFCKFDRSHPEEPIESRED QLNTERLSILEDLLPSKHNPSKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 7e-85 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RB2501_13474 | YP_003195684.1 | capsular polysaccharide biosynthesis protein | VFG1300 | Protein | 2e-84 | 47 |
| RB2501_13474 | YP_003195684.1 | capsular polysaccharide biosynthesis protein | VFG0029 | Protein | 3e-81 | 42 |
