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Name : RB2501_12964 (RB2501_12964) Accession : YP_003195584.1 Strain : Robiginitalea biformata HTCC2501 Genome accession: NC_013222 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATPase subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2107153 - 2109705 bp Length : 2553 bp Strand : - Note : - DNA sequence : ATGGATGATAATTTCTCACCGCGAGTAAAAGATGTAATTGCTTACAGCAAGGAGGAGGCACTGCGCCTGGGCCACGACTT CATCGGGACGGAACACCTGATGCTCGGCCTGCTGCGCGACGGGAACGGGAAGGCAATCAGCATACTCGATGCGCTGGACG TGGACCTGGACCACCTGCGCAGAAAGGTGGAAATCCTCTCCCCGGCGAACCCGGAAGCGGGCTCGCAACCCAAGGATAAG AAAAACCTGCACCTCACCCGTCAGGCGGAGCGCGCCCTGAAGACCACCTTTTTGGAGGCCAAATTGTTTCAGAGCTCATC CATCAATACGGCGCATCTCCTGCTCTGTATCCTGCGAAACGAAAACGATCCGACCACCAAGCTTCTGCACAAGATGAAGG TGGACTACGACGGGGTCAAGGAGCAATTCAAAAGCATGATCACCAGCGACGACGACTATACGGACAGCCCGACCTCGGAA TCCTTTCCGAGCGATTCGGACGACACCGGGGACAGCAAGGAGGGCACTTTTTCAAGCGGCACCTCCCAGAAAGGAAACAA GAAATCCAAAACCCCTGTTCTCGATAATTTTGGCAGGGATCTCACCCGCCTGGCGGAAGAAAACAAACTCGACCCGGTTG TCGGTCGGGAAAAGGAAATTGAACGCGTCTCGCAAATACTGAGCCGCCGCAAAAAGAACAACCCGCTGCTGATCGGGGAA CCCGGGGTGGGCAAAAGCGCCATCGCCGAAGGGCTCGCCCTGAGGATCATCAACAAAAAGGTATCCCGCATATTGTACAA CAAGCGCGTGGTAACCCTGGACCTGGCGTCCCTGGTTGCCGGCACGAAGTACCGCGGGCAGTTTGAAGAGCGGATGAAAG CCGTGATGAACGAACTGGAAAAGAACGACGACGTCATCCTGTTTATCGACGAGATCCACACCATTGTGGGAGCCGGAGGC GCCACGGGAAGCCTGGATGCGTCCAACATGTTCAAGCCGGCCCTCGCCCGGGGCGAAATTCAATGCATCGGGGCCACGAC CCTGGATGAATACCGCCAGTACATCGAGAAGGACGGCGCCCTGGAACGGCGTTTCCAGAAGGTGATGGTGGAACCGACCA CGGTGGAGGAAACCATCGAAATCCTCCGCAACATCCGCGGAAAATACGAGGATCACCACAACGTAAACTACACGGAAGAG GCCCTGGTAGCCTGCGTGAAGCTCACGAACCGCTACATGACCGACCGCTTCCTCCCGGACAAGGCAATCGACGCCATGGA TGAAGCCGGATCGCGGGTGCACATCGTGAACATGGACGTGCCCAAGCAGATCCTCGAGCTCGAAAAGCAGCTTGAAGAGG TGCGCGAACTCAAGAACAGCGTGGTCAAGAAACAGCGTTACGAGGAGGCCGCCAAATTGCGGGACGACGAAAAACGACTG GAAAAAGACCTGTCTACCGCCCAGGAGAAATGGGAAGAAGACAGCAAACTGAACCGGGAAACCGTCTCGGAAGACAACGT CGCCGACGTGGTCTCGATGATGAGCGGCATCCCGGTCAACAAAATTGCCCAGACCGAAAGCAATAAGCTGGCCGAACTGC CGCAGCTGATCAAGAACAGCGTCATTGGGCAGGACGAAGCCGTGGCCAAGGTGGCCAAAGCCATCCAGCGGAACCGGGCC GGGCTGAAAGACCCCAACAAGCCGATCGGGAGTTTTATTTTCCTCGGACAAACCGGGGTCGGGAAAACCCAGTTGGCCAA AGTACTCGCCAAGGAACTCTTTGACTCGGAGGACGCCCTGGTGCGGATCGACATGAGCGAATACATGGAAAAATTCGCCA TCTCCCGCCTGGTGGGAGCGCCCCCCGGCTATGTCGGCTATGAGGAAGGCGGGCAGCTCACCGAAAAGGTGCGGCGCAAG CCCTACTCCGTAATCCTGCTGGACGAGGTGGAAAAGGCACACCCGGATGTTTTCAATATGATGCTGCAGGTACTCGACGA CGGCTTCCTCACGGACAGCCTCGGCAGGAAGATCGACTTCCGCAATACCATTATCATCATGACCTCGAATATCGGGGCAC GGCAACTCAAGGATTTCGGCCAGGGTGTCGGCTTCGGCACCTCGGCGAAGAAATCCCAGGCCGATACGCACCAAAAGAGC GTTATCGAGAATGCTTTGAAAAAAGCCTTTGCACCGGAGTTCCTCAACCGGATTGACGACGTTATTGTATTTAACCCGCT GGAACGGGAGCACATACACGAGATCATCGAAATCGAACTCAAGAAACTCTACGACCGCATTGCGGATATCGGCTACCATC TGACCCTTACCGATAAGGCGCGTGACTATATTGCCGAGAAGGGCTTCGATAAGCAATACGGGGCCCGGCCGCTCAAACGG GCCATCCAGAAGTATATCGAGGATGCACTGGCCGAAGAGATCGTCAACTCGAAGCTCAACGAAGGGGACAGCATCACCAT GGACCTGGACGAGGAGGGTGACAAGTTGACCATTTCCATTAAGAAAGCGAGTAAATCCTCCAAGGAAGCCTGA Protein sequence : MDDNFSPRVKDVIAYSKEEALRLGHDFIGTEHLMLGLLRDGNGKAISILDALDVDLDHLRRKVEILSPANPEAGSQPKDK KNLHLTRQAERALKTTFLEAKLFQSSSINTAHLLLCILRNENDPTTKLLHKMKVDYDGVKEQFKSMITSDDDYTDSPTSE SFPSDSDDTGDSKEGTFSSGTSQKGNKKSKTPVLDNFGRDLTRLAEENKLDPVVGREKEIERVSQILSRRKKNNPLLIGE PGVGKSAIAEGLALRIINKKVSRILYNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKNDDVILFIDEIHTIVGAGG ATGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALERRFQKVMVEPTTVEETIEILRNIRGKYEDHHNVNYTEE ALVACVKLTNRYMTDRFLPDKAIDAMDEAGSRVHIVNMDVPKQILELEKQLEEVRELKNSVVKKQRYEEAAKLRDDEKRL EKDLSTAQEKWEEDSKLNRETVSEDNVADVVSMMSGIPVNKIAQTESNKLAELPQLIKNSVIGQDEAVAKVAKAIQRNRA GLKDPNKPIGSFIFLGQTGVGKTQLAKVLAKELFDSEDALVRIDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRRK PYSVILLDEVEKAHPDVFNMMLQVLDDGFLTDSLGRKIDFRNTIIIMTSNIGARQLKDFGQGVGFGTSAKKSQADTHQKS VIENALKKAFAPEFLNRIDDVIVFNPLEREHIHEIIEIELKKLYDRIADIGYHLTLTDKARDYIAEKGFDKQYGARPLKR AIQKYIEDALAEEIVNSKLNEGDSITMDLDEEGDKLTISIKKASKSSKEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-176 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RB2501_12964 | YP_003195584.1 | ATP-dependent Clp protease, ATPase subunit | VFG0079 | Protein | 0.0 | 50 |
| RB2501_12964 | YP_003195584.1 | ATP-dependent Clp protease, ATPase subunit | VFG0080 | Protein | 3e-145 | 50 |
