|
Name : RB2501_12879 (RB2501_12879) Accession : YP_003195567.1 Strain : Robiginitalea biformata HTCC2501 Genome accession: NC_013222 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 2073718 - 2074446 bp Length : 729 bp Strand : + Note : - DNA sequence : GTGAAGGTAGTAGCCCTGATTCCCGCCCGATACGGCGCCTCCCGCTTCCCCGGCAAACTCATGAAAGACCTGGCCGGCAA GCCGGTAATCGTGCGTACCTACGAGGCTGCCGTTCGGACAGGTTTGTTCGATCAGGTGGTGGTGGTTACCGACAGCGAGG AAATCGGCCAGGCCGTTCGCGATGCCGGGGGTTCCGTAATCATGAGCCGGGAAACACATGAAACCGGCAGCGACCGGATT GCGGAGGCCGTCGAGGGGCTCGATGTGGATATCGCCGTAAACGTGCAGGGGGATGAACCTTTTATCGAAGGGGAAAGCCT GGCCAAGCTCCTGGAGGTTTTCCGGGATGACCCGGAGAAGACCATCGACCTGGCATCGCTGATGACCGAAATAACGGACC CGGAAGAAATCGCCAACCCGAATACCGTCAAGGTGATTACCGACCACCGGGGCTTTGCTCTGTATTTTTCGCGCGCCCCG ATCCCTTTCCAGCGCGCGGAGCATCCCCGGGCCACCTACTATAAGCATAAGGGGGTGTATGCGTTCCGCAAACAGGCGCT GCTGGATTTCAGGCGGCTGCCCATGCAGCCCCTGGAAGCCGTGGAGAAAATTGAAGCCATCCGCTACCTGGAGTACGGGA AGCGGATCAAAATGGTGCAGACACGGGTCACGGGGATTGAGATCGACACCCCGGAAGACCTCGAAAAGGCAAAGGCAGCA TGGACTTGA Protein sequence : MKVVALIPARYGASRFPGKLMKDLAGKPVIVRTYEAAVRTGLFDQVVVVTDSEEIGQAVRDAGGSVIMSRETHETGSDRI AEAVEGLDVDIAVNVQGDEPFIEGESLAKLLEVFRDDPEKTIDLASLMTEITDPEEIANPNTVKVITDHRGFALYFSRAP IPFQRAEHPRATYYKHKGVYAFRKQALLDFRRLPMQPLEAVEKIEAIRYLEYGKRIKMVQTRVTGIEIDTPEDLEKAKAA WT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-41 | 43 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-40 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-40 | 42 |
