Gene Information

Name : RB2501_12247 (RB2501_12247)
Accession : YP_003195445.1
Strain : Robiginitalea biformata HTCC2501
Genome accession: NC_013222
Putative virulence/resistance : Resistance
Product : integral membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1230
EC number : -
Position : 1932308 - 1933039 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATTGGACGACATTTCAAGTATTGTGAATTTAGACTTTGATATTTCTAACCGAAAACTGACCATTTTTCACAGCGG
TGAAATTGACCAAATCGAAAAATCAGTTCTTGAACTGAATTTGGGCGGAAAGGTTATCTCTACCGAACAGACCAACCAAA
CGGAATTTAATGAAAACTCAAACCAGAAAAAATTACTCTGGTCTGTACTCGGAATAAATTTCGTCTTTTTCTTCATCGAA
ATGACAACTGGAATAATCTCAAAATCAATGGGATTAGTTGCCGACAGTTTGGATATGCTTGCCGACAGCTTTGTTTACGG
AATTAGCTTATTTGCGGTTGGAGGAACATTGACGAGAAAAAAGAGGATTGCAAAACTCGCTGGATATTTTCAAATAACAC
TTGCTATCATTGGATTTGTAGAAGTTTTAAGGAGATTTTTTAAAGAGGAAGAACTTCCTGACTTTTTGACAATGATAATC
ATTTCGATTTTCGCACTTATCGCTAATGGAGTTTGCCTTTATATTTTGCAAAAGTCAAAGAGCAAAGAAGAGGCTCATAT
GAAAGCGAGTATGATTTTCACATCAAACGATGTGATTATTAATTTAGGAGTAATAATAGCTGGGGTTTTGGTGAATTTGT
TGGATTCAAACAAACCTGATTTGATAATAGGAACAATCGTTTTTATTTTGGTTATACAAGGTGCATTTAGAATATTGAAA
TTAAGTAAATAA

Protein sequence : 
MKLDDISSIVNLDFDISNRKLTIFHSGEIDQIEKSVLELNLGGKVISTEQTNQTEFNENSNQKKLLWSVLGINFVFFFIE
MTTGIISKSMGLVADSLDMLADSFVYGISLFAVGGTLTRKKRIAKLAGYFQITLAIIGFVEVLRRFFKEEELPDFLTMII
ISIFALIANGVCLYILQKSKSKEEAHMKASMIFTSNDVIINLGVIIAGVLVNLLDSNKPDLIIGTIVFILVIQGAFRILK
LSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 2e-42 45
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 3e-42 45
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 3e-42 45
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 3e-42 45
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 2e-42 45
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 2e-42 45
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 2e-42 45