Gene Information

Name : RB2501_11622 (RB2501_11622)
Accession : YP_003195320.1
Strain : Robiginitalea biformata HTCC2501
Genome accession: NC_013222
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1816495 - 1817181 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAAATATATTAAACGTTCGCGAGCTTCGGAAGAGCTATGACAGCGGAGGGAGCGAACTAACCGTCCTGGATGATAT
TACCTTTTCGGTTCCCGAAGGGACCTCCTACGCCATTGTAGGGCCCTCCGGGAGTGGGAAAACCACCTTGCTGGGACTTT
GCGCCGGCCTGGATGCCACAGACGCGGGCACCGTGGAACTCTGCGGGGTTTCCCTGGAAAGCCTCAGCGAGGACGAACGG
GCTGTGCTGAGAAACCGGAAGGTCGGCTTTATTTTCCAGAACTTCCAATTGTTGCCCACCCTCACCGCCCTGGAAAACGT
GAGCGTACCCCTGGAATTGCGGGGCGAAAAACAGGCGGGCGAACAGGCACGGGAACTCCTGGCAAAAGTAGGCCTGGGGG
AACGCGTGCATCATTATCCCAGTCAGCTTTCCGGCGGGGAACAGCAGCGGGTGGCACTGGCCAGGGCTTTTGCAAACCGG
CCGGAGGTACTTTTTGCGGACGAACCGACTGGGAACCTGGACGAGGAAACCGGAAACCGGGTGGTGCAATTGCTCTTTGA
CCTGAACAAGGAGGCGGGCACCACGCTGATCATCGTCACCCACGATATGGACCTGGCCCGTCGCTGCGACCGGATGCTTC
GGCTCAAAGGGGGCAAGGTTTACCAACGCGAAGAATTGCCCGCCTGA

Protein sequence : 
MSNILNVRELRKSYDSGGSELTVLDDITFSVPEGTSYAIVGPSGSGKTTLLGLCAGLDATDAGTVELCGVSLESLSEDER
AVLRNRKVGFIFQNFQLLPTLTALENVSVPLELRGEKQAGEQARELLAKVGLGERVHHYPSQLSGGEQQRVALARAFANR
PEVLFADEPTGNLDEETGNRVVQLLFDLNKEAGTTLIIVTHDMDLARRCDRMLRLKGGKVYQREELPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-35 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RB2501_11622 YP_003195320.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-39 46
RB2501_11622 YP_003195320.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-33 46
RB2501_11622 YP_003195320.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-37 42
RB2501_11622 YP_003195320.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-36 41