Gene Information

Name : Dtox_4107 (Dtox_4107)
Accession : YP_003193400.1
Strain : Desulfotomaculum acetoxidans DSM 771
Genome accession: NC_013216
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : 2.7.10.2
Position : 4277197 - 4277937 bp
Length : 741 bp
Strand : -
Note : TIGRFAM: capsular exopolysaccharide family; KEGG: bha:BH3668 capsular polysaccharide biosynthesis

DNA sequence : 
ATGGCTGTAGAGAAGTTAATCACATTGCATAGTCCTAAATCACCGATTGCCGAGGCATACCGGATATTGAGAACCAATAT
TCAGTTTTCCAGCCTGGACAAGCCGATTAAGTCTTTGTTGGTAACCAGCGCGGGGCCCAATGAAGGAAAGTCATTAACCG
TGGCCAACCTGGCAGTTGCTTTTGCCCAGGCCGGGTTAAAGGTTTTAATTATTGATTGTGATATGAGGAAACCCACACAG
CACAAAATATTTGAGCTTAGCAATATTAAAGGTTTGTCCAATGTTTTAATTGGAGAGCTTTCACTTATGAAAGGGCTTTT
GGATGTGGGAATTGAAGGCCTCAAGCTGCTGCCCACCGGACCGACCCCGCCTAACCCCTCTGAATTGCTGGGATCACAGC
GCATGAAAAACTTTATTGCCGAGCTGTATGAGGTGTTTGACATTATTCTGGTGGATACTCCGCCTGTAGTGCCTGTTACC
GATGCAGCGCTGATGGCAGCAAATGTGGACGGGGTTTTGCTGGTAGTGGCATCCGGACAAGCCAAGATAGAAATGACGCT
GAAGGCCAAAGAATTATTGTTGAATGTGAATGCCCGGATTATAGGAACTGTTTTGAATATGTTGAATGTCCAGGGTGAAG
AATATTATTATTACTACTATTATTACAGTGGCGAGGATGGTGGCAAAAAGCCAAAAAATAAAGGCCACCGCAAAAAAAAT
TTGCCGGCAGCTACTATGTGA

Protein sequence : 
MAVEKLITLHSPKSPIAEAYRILRTNIQFSSLDKPIKSLLVTSAGPNEGKSLTVANLAVAFAQAGLKVLIIDCDMRKPTQ
HKIFELSNIKGLSNVLIGELSLMKGLLDVGIEGLKLLPTGPTPPNPSELLGSQRMKNFIAELYEVFDIILVDTPPVVPVT
DAALMAANVDGVLLVVASGQAKIEMTLKAKELLLNVNARIIGTVLNMLNVQGEEYYYYYYYYSGEDGGKKPKNKGHRKKN
LPAATM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-22 45
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-24 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtox_4107 YP_003193400.1 capsular polysaccharide biosynthesis protein VFG1298 Protein 1e-23 46
Dtox_4107 YP_003193400.1 capsular polysaccharide biosynthesis protein VFG1368 Protein 2e-10 41