Gene Information

Name : Dtox_4019 (Dtox_4019)
Accession : YP_003193327.1
Strain : Desulfotomaculum acetoxidans DSM 771
Genome accession: NC_013216
Putative virulence/resistance : Virulence
Product : RNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 4199955 - 4201202 bp
Length : 1248 bp
Strand : -
Note : PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: ara:Arad_9023 reverse transcriptase/maturase protein

DNA sequence :
ATGAACAAAACAAAGCCGTACGAAATCTCCAAGCACGTAGTGCTGGAGGCATTTCAACGAGTGAAAGCAAATAAGGGGGC
AGCCGGAATAGACGACGAAAGTCTGGAAGCATTTGAAGCAAACTTGAAGAACAACCTATATAAGATTTGGAACAGGATGT
CTTCTGGTAGCTATTTTCCCCCGCCCGTTAAAGCTGTGGAAATACCCAAGAAAACCGGTGGTAAGAGAATACTCGGGGTA
CCCACTGTGGCAGACCGGGTAGCACAGATGGTGGCCAAAATATATTTTGAGCCGCTTGTGGAGCCACATTTCCACCCGGA
CTCTTATGGGTATCGGCCAGGAAAATCAGCAGTTGATGCGCTAGCTGTTACCCGGCAGCGATGCTGGAAGTATGACTGGG
TGCTGGAGTTCGATATCAAAGGTCTGTTCGATAATATTAACCATGACTTATTGATGAAAGCTGTCCGCAAACATACCGAT
AACCCATGGGTTATACTCTACATTCAGAGATGGCTCAAAGCACCTTTTCAAATGCCAGATGGCATGCTCAAGGAACGTAC
AAAAGGTACTCCGCAGGGAGGCGTCATTAGTCCCGTTCTAGCTAATTTGTTCCTGCACTATGCGTATGATGTATGGATGG
CACGGAATCATCCCGACAAGCCATTCGCTCGTTATGCCGATGATAGTGTAGCACACTGCCGCAGCAAGAAAGATGCGGAA
AAACTTCATGACAGCTTAAAGGAGCGGTTTGCGGAATGTGAGTTAGAACTCCATCCGGACAAGACCCGCATTGTCTATTG
CAAAGACGACGATCGGCGAGGTGAACATCAAGAAACCAAATTCGACTTTCTGGGCTACACCTTCCGGCCGCGCAGGTCTA
AGAACAAATACGGAAAGCACTTTGTCAACTTCACCCCGGCAGCTAGTAATAAAGCGAAAAAGGCTATGCGTCAAACCATT
CATGATTGGCGTGTACATCTGAAACCGGACAAGGCACTTGAAGACTTATCGCGTATGTTTAATCCGGTAATCAGAGGCTG
GGTAAACTATTACGGGCGCTTTTACAAGTCGGAACTGTATTCTGTACTCAGGCACATGGACCGGGCCTTAGTCCGCTGGG
TGCAACGAAAGTTTAAGAAATTCGCTACTCACAAACGGCGGGCGACTTATTGGCTCGGCAAGATTGCCAGGCGTGAACCG
AAGCTGTTCATACATTGGCAAATGGGGATTTGTCCTGCGGCTGGATAA

Protein sequence :
MNKTKPYEISKHVVLEAFQRVKANKGAAGIDDESLEAFEANLKNNLYKIWNRMSSGSYFPPPVKAVEIPKKTGGKRILGV
PTVADRVAQMVAKIYFEPLVEPHFHPDSYGYRPGKSAVDALAVTRQRCWKYDWVLEFDIKGLFDNINHDLLMKAVRKHTD
NPWVILYIQRWLKAPFQMPDGMLKERTKGTPQGGVISPVLANLFLHYAYDVWMARNHPDKPFARYADDSVAHCRSKKDAE
KLHDSLKERFAECELELHPDKTRIVYCKDDDRRGEHQETKFDFLGYTFRPRRSKNKYGKHFVNFTPAASNKAKKAMRQTI
HDWRVHLKPDKALEDLSRMFNPVIRGWVNYYGRFYKSELYSVLRHMDRALVRWVQRKFKKFATHKRRATYWLGKIARREP
KLFIHWQMGICPAAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 2e-125 56
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 3e-91 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtox_4019 YP_003193327.1 RNA-directed DNA polymerase VFG1512 Protein 2e-91 47