Gene Information

Name : Dtox_2729 (Dtox_2729)
Accession : YP_003192130.1
Strain : Desulfotomaculum acetoxidans DSM 771
Genome accession: NC_013216
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2883320 - 2884006 bp
Length : 687 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA4920 DNA-binding response regulator

DNA sequence : 
ATGAAACGCATCTTGATTATTGAAGACGATCTTCATATTGCCGAACTGGAGAGGGACTATCTTCAGTTGAACGGGTTTAA
GGCCGATATCGTCCAGGATGGGGTTCAGGGACTGAAAAAGGCTCTCCCGGGCAATTATGACGTCATTATTGTGGATCTGA
TGTTGCCCGGCAAGGACGGCTATGAAATCATCAGAGAAATAAGGGAAAAACTAGATGTTCCTGTAGTGGTGGTTTCGGCC
AAAGATGAGGACGTGAACAAAATCAGGGGACTGGAGTATGGAGCCGACGATTATCTGACCAAACCCTTCAGCCCAGGCGA
ACTGGTGGCCAGGATCAAGTCCCATATCAGAAGATATGAGCGGCTTAAGGGCAACCATGTTCCCTCTGAAGTTATCATTC
ACAGGGGGTTGGAAATCAATACGGCATCTCACAGGGTGTACCTCAATGGCCAGCAAGTTCAGATGACCACCAGGGAATAT
GAATTGTTGTTGTTTCTTGCCTCCAACCCTGGCATTGTTTTTTCAAAAGAGCATATTCTTGTAAGCATATGGGGCGATGA
TTACTTTGGGGATACGGCAACCGTGGCTGTACATATCCAAAAAATAAGGAAAAAGATAGAAAAGGATCCGTCTAACCCAG
AGTTTATCGAAACTCTCTGGGGGACGGGCTACCGCTTTAATAAGTAA

Protein sequence : 
MKRILIIEDDLHIAELERDYLQLNGFKADIVQDGVQGLKKALPGNYDVIIVDLMLPGKDGYEIIREIREKLDVPVVVVSA
KDEDVNKIRGLEYGADDYLTKPFSPGELVARIKSHIRRYERLKGNHVPSEVIIHRGLEINTASHRVYLNGQQVQMTTREY
ELLLFLASNPGIVFSKEHILVSIWGDDYFGDTATVAVHIQKIRKKIEKDPSNPEFIETLWGTGYRFNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-39 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtox_2729 YP_003192130.1 two component transcriptional regulator, winged helix family HE999704.1.gene2815. Protein 5e-41 42
Dtox_2729 YP_003192130.1 two component transcriptional regulator, winged helix family AE015929.1.gene1106. Protein 1e-30 41
Dtox_2729 YP_003192130.1 two component transcriptional regulator, winged helix family NC_005054.2598277.p0 Protein 9e-43 41
Dtox_2729 YP_003192130.1 two component transcriptional regulator, winged helix family NC_014475.1.orf0.gen Protein 9e-43 41
Dtox_2729 YP_003192130.1 two component transcriptional regulator, winged helix family NC_012469.1.7685629. Protein 2e-36 41
Dtox_2729 YP_003192130.1 two component transcriptional regulator, winged helix family AF155139.2.orf0.gene Protein 8e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtox_2729 YP_003192130.1 two component transcriptional regulator, winged helix family VFG1563 Protein 3e-39 44
Dtox_2729 YP_003192130.1 two component transcriptional regulator, winged helix family VFG1702 Protein 2e-38 43