Gene Information

Name : Dtox_0251 (Dtox_0251)
Accession : YP_003189827.1
Strain : Desulfotomaculum acetoxidans DSM 771
Genome accession: NC_013216
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 269023 - 270522 bp
Length : 1500 bp
Strand : +
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bha:BH0098 lysyl-tRNA synthetase

DNA sequence :
TTGAGTATCGAAGAAGAACTAAGTTCCGCAGAAAATCTCAATGAATTAAGTGAATTAATGCGTGTGCGCAGGGAAAAACT
GCAGGAACTGATTGATAAGGGTTATCATCCCTACGGGGACAAATACGATCGGCTTCATTGCTCAGCAGAGATTATAAACA
ATTTCGAGCAGTATGAAGGGCAGGAAGTTTCTGTTGCCGGCCGTCTGATGGCTAAGCGGGGTCATGGGAAGGCTGGGTTT
GCTAATTTGCAGGATACTGCCGGAAGTATCCAGGTATATGGTAGGCTGAATAACCTTGGTTCAGAAGATTACGAGCTCTT
TCAAAAGTTGGATATTGGAGACATAATAGGTGTTAAAGGTAAGGTTTTTAGAACACAGAAGGGTGAAATCACGGTTGAGA
TACAGGTCTTGACCTTACTTTCTAAATCTCTTAGGCCTTTGCCCGAAAAATGGCATGGCCTAAGAGATGTAGAGCTGCGA
TACAGACAGCGGTACGTGGATTTAATAGTTAACCCGGAAGTTAAAAATCAGTTTGTAGCAAGGAGTCAGATAGTTCGTTG
TATTCGTAATCTATTGGATGAAAAGGGTTTTCTAGAGGTGGAGACCCCGATGATGCAGTCAATTGCCGGTGGTGCTGCCG
CACGTCCTTTTATTACCCATCATAATGCGCTTGATATGGAACTTTATTTGCGCATAGCTCCTGAATTATACTTGAAAAGA
CTTTTAGTTGGTGGTTTTGATAAAGTGTATGAAATAAACCGCAACTTTCGCAATGAAGGTATTTCTACCAAGCATAATCC
TGAGTTTACTATGTTGGAGCTTTACCAGGCTTATGCTGATTATTATGACATGATGGAGATGGCCGAATATTTAGTGTATA
ACACTTCTTTAAGAGTGAACGGGACTCCTGTTATTAGTTATCAGGAGCAGGAGATCAATCTAGTTCCTCCCTGGAATAGA
ATGCCCATGCTAGAGGCAGTGAAAAAATACAGTGGTTTGGATTTTTCCATGCTCAAGTCTGATCAGGAAGCAGTTAAAGC
AGCGCAGGGCCTGGGATTAGGTGTGGTGCAGCCTTCCGATACCTGGGGAGAAGTTTTAAATAAAGTTTTCGAGGAAATGG
TGGAGCCTAAACTAATTCAACCAACTTTTATTATTGATTATCCGGTAGAGATATCACCGTTGGCTAAGAAAAAAGATGAT
GATGCCAGTCTTACCTATCGTTTTGAACTTTTCATATATGGCAGGGAAATGGCCAATGCATTTTCTGAGTTAAATGATCC
TATTGATCAGAAAGCCAGATTTCAAAAGCAAGTTGAACAAAGACGCAGTGGTGATGATGAGGCTCATATGATGGATGAAG
ATTATATCCAAGCCCTGGAGTATGGAATGCCCCCGGCTGGGGGGCTTGGTATAGGTATAGATCGCCTGGTTATGCTTTTA
ACTAATGCTGCCTCAATCAGGGATATTATTCTTTTTCCATTACTAAAGCCACGAGAGTAG

Protein sequence :
MSIEEELSSAENLNELSELMRVRREKLQELIDKGYHPYGDKYDRLHCSAEIINNFEQYEGQEVSVAGRLMAKRGHGKAGF
ANLQDTAGSIQVYGRLNNLGSEDYELFQKLDIGDIIGVKGKVFRTQKGEITVEIQVLTLLSKSLRPLPEKWHGLRDVELR
YRQRYVDLIVNPEVKNQFVARSQIVRCIRNLLDEKGFLEVETPMMQSIAGGAAARPFITHHNALDMELYLRIAPELYLKR
LLVGGFDKVYEINRNFRNEGISTKHNPEFTMLELYQAYADYYDMMEMAEYLVYNTSLRVNGTPVISYQEQEINLVPPWNR
MPMLEAVKKYSGLDFSMLKSDQEAVKAAQGLGLGVVQPSDTWGEVLNKVFEEMVEPKLIQPTFIIDYPVEISPLAKKKDD
DASLTYRFELFIYGREMANAFSELNDPIDQKARFQKQVEQRRSGDDEAHMMDEDYIQALEYGMPPAGGLGIGIDRLVMLL
TNAASIRDIILFPLLKPRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-114 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtox_0251 YP_003189827.1 lysyl-tRNA synthetase VFG1668 Protein 2e-114 50