Gene Information

Name : Dtox_2300 (Dtox_2300)
Accession : YP_003191736.1
Strain : Desulfotomaculum acetoxidans DSM 771
Genome accession: NC_013216
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2467660 - 2468763 bp
Length : 1104 bp
Strand : -
Note : TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; KEGG: gme:Gmet_1624 5-amino-6-(5- phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine dea

DNA sequence :
ATGGATGAACAGTATATGAAAATGGCTCTGGATTTAGCAGCCAGGGCCAGAGGAAGGACAAGTCCCAATCCTATGGTAGG
CTCTGTTATAGTTAAAAACGGAGCAGTAGTTGGCAGAGGCTATCATAAGAAGGCCGGTACGCCTCACGCGGAAATACACG
CCTTGAAGGAAGCCGGCGAGGCTGCCAGAGGAGCTACTATTTATGTCACCTTAGAGCCCTGCTGCCACCATGGCCGTACC
GGTCCTTGCACCGAGGCCATATTGTCAGCGGGCATTAAACGGGCAGTCGTTGCTATGACCGATCCCAATCCTCTGGTAGC
CGGAAAAGGACTGGACATACTAAGAAAGGCGGGCGTGGAGGTAGTATCCGGACTGTTGGCAGAAGAAGCCGCTAAATTAA
ACGAGGTATTTATTAAATACGTAAGTACCGGAATGCCTTTTGTGCTGTTAAAAACAGCTATGAGCCTGGATGGCAAAATT
GCCGCTTATACCGGTCATTCCCGGTGGATTACGGGATCGGCTTCACGTGCTTACGTTCACCACCTGCGTGACAGCTATGA
TGCCATATTAATTGGCATAGGAACTTTAATGGCAGACAACCCTTCTCTGACTGCAAGACTCTCCTGCCCGGAAGATGGAG
TTAAAGGAAAAGATCCTGTGCGTGTAATAGTTGACAGCCTGGCCCGTACACCTCCTGAGGCTAAAGTTTTGACTCAAATC
TCTGCCGCTCCGACTATTATTGCAATAACAGCTGCAGCACCCGAAGAAAGAGTGCAAAAGCTTGTTGCTGCGGGAGCACA
AATAATCATTGCCGGAAACGGGCCTAAGATCGATTTGCCATACTTATTTAAGTCCCTGACCGCTATTGATATAACCAGTA
TATTAATTGAAGGCGGTGCTGCGGTAAATGCTTCTGTTTTGGAACAAAAACTGGCAGATAAGCTTTTGTGGTTTATAGCT
CCTAAGATCATCGGCGGTAAAGAGGCACCCGGCCCGGTGGGAGGGCGAGGAGTTGCGGCAGTCAGTGAAGCGCTGCTGCT
GGAGCGCATATCTGTTCAGCGTTTCGAAGAGGATATTTGCCTGGAGGGTTACCTCAGAAAATAA

Protein sequence :
MDEQYMKMALDLAARARGRTSPNPMVGSVIVKNGAVVGRGYHKKAGTPHAEIHALKEAGEAARGATIYVTLEPCCHHGRT
GPCTEAILSAGIKRAVVAMTDPNPLVAGKGLDILRKAGVEVVSGLLAEEAAKLNEVFIKYVSTGMPFVLLKTAMSLDGKI
AAYTGHSRWITGSASRAYVHHLRDSYDAILIGIGTLMADNPSLTARLSCPEDGVKGKDPVRVIVDSLARTPPEAKVLTQI
SAAPTIIAITAAAPEERVQKLVAAGAQIIIAGNGPKIDLPYLFKSLTAIDITSILIEGGAAVNASVLEQKLADKLLWFIA
PKIIGGKEAPGPVGGRGVAAVSEALLLERISVQRFEEDICLEGYLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-47 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-47 44