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Name : APA01_43180 (APA01_43180) Accession : YP_003189484.1 Strain : Genome accession: NC_013211 Putative virulence/resistance : Virulence Product : type I/III endonuclease restriction R subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 139994 - 142552 bp Length : 2559 bp Strand : - Note : Probably pseudogene, C-terminal domain of a gene truncated by transposon DNA sequence : GTGGACATGGTGCTGTTCCTTAACGGGCTGCCCATCGTCACGCTGGAGCTGAAGAACGCCTGGACCCACCAGACCGCCCG CTACCACGGCCAGAAGCAGTACCGTGAGCGTGATGCAAACCAGACCCTGCTGCGCTTTGGCCGCGTGCTGGTCCACATGA CCGCCGACACCGACGAGGTGTGGATGGCGACGAAGCTGGCGGGAGCCTCGACCTTCTTCCTGCCGTTCAACAAGGGGCAC AACGAGGGCGCGGGCAACCCGCCGAACCCCAATGGCCACAAAACGTCCTACCTGTGGGAAGAGGTTCTGCAACCGCAGAG CCTTGCCGGGATCATCCAGCATTTCGTCCTGCTGGAGGGCAAGAAGACCGACCCGCTGACGAAGAAGACGCTGATCTTCC CGCGATATCACCAGCTGAATGTAGTCCGAAAGCTGCTGTCCCACGCCGCTCAGACGGGCGTAGGGCATAAATACCTGATC CAGCACTCTGCCGGCTCGGGAAAATCCAACAGCATCACCTGGGCCGCCTACCAGCTGATCGAGACCTATCCGGCGAAGCT AGACCTGCCCGGCGTCAGGGCGCTGGACGCCCCGCTGTTCGACAGCGTGATCGTCGTGACCGACCGCCGCCTGCTGGACA AGCAGCTGCGCGACAACATCAAGGATTTCTCCGAGGTCAAAAATATCGTGGCCCCGGCGCTGAAGTCCTCGGACCTGAAA GCAGCACTGGAGAACGGCAAGAAGATCATCATCACGACCATCCAGAAGTTCCCCTTCATCATCGACGGTATAGAGGATTT GGGCGACAAGCGTTTCGCAGTGATCATCGACGAGGCGCACAGCGGCCAGAGCGGCATCGCTAGTGACAAGATGAATCAGG CAATGGGCGGCGACCCAGACGAAGATGACGCGCAGGACAAGATTCTGGCGGCCATGCAGGCCCGCAAGATGCGCGGCAAT GCGTCCTACTTTGCCTTCACCGCGACGCCGAAGCCGATCACCTTGGAGAAGTTCGGTGAGCAGCAGTCGGACGGCCGCTT CCGCCCGTTCCACCTGTACAGCATGAAGCAGGCGATCGAGGAGGGCTTCATCCTCGACGTTTTGGCGAATTACACGACCT ACAAGGGCTATTACGAGATCCAGAAGTCCATTGAGGACAATCCTCTGTTCGACACATCCAAGGCGCAGAAGAAGCTGCGC GCCTATGTCGAGCGGAGCCAGCAGACGATCAACACCAAGGCCGAGATCATGGTCGAGAATTTCATCGACAAGGTGGTAAA CCCCAAGAAATTGCGCGGCAAAGGCAAAGGGATGATCGTAACCCAAAATATCGAGGTGGCGATCCGCTACTACAAGGCCG TACAGGCAGAGCTTGCCAAGCGCGGTAACCCGTTCAAGGCGCTAATCGCCTTCTCGGGCGAGAAGGAGGTCGATGGGGTC AAGTACACCGAGACCGAGATGAATGGCGTACCTGAGGACAAGACCCGCAGCGAGTTTGATAAGGATGAATTCCGCCTGCT GATCGTCGCAAACAAGTATCTCACCGGTTTCGACCAGCCGAAGCTCTGTGCGATGTACGTCGACAAAAAGCTGCAGTCGG TTCTGGCAGTCCAGGCCCTGTCCCGTTTGAACCGGTCCTCCCCCAAGCTAGGCAAACGGACCGAGGATCTGTTCGTTCTC GACTTCTTCAACTCGATCGAGGACATCAAGGCTGCCTTCGACCCGTTCTTCACGGTGACGACCCTATCCGAGGCGACGGA CGTGAACGTTTTACACGAGCTGAAAGCAGCTTTGGATGATGTCGGCGTCTACGAATGGTCAGAGGTAGAGGAATTCTGCA AAAGGTTCTTTGACGGCGAAGATTCCGAGAAGCTCAGCCCCCTGATTGACGTGGCTGCCGAACGTTTCAACACCGGCCTG GAACTGGAAGACCCGGAGAAGATCGACTTCAAGATCAAAGCGAAGCAGTTCGTGAAGATCTACGGCCAGATGGCTGCAAT CATGCCGTTCGAAGTGGAGGCTTGGGAGAAGCTCTTCTGGTTCCTGAAGTTCTTGGTCCCGAAGCTAAACATTAAGGACC CGAACCAGGATGCGTTGGATGATCTTCTCAAGGCCGTTGACCTTTCGTCATATGGGCTAGAGCGGACAAAACTAAACCAG ACCATCGGCCTGGACACTTCAGAAGCAGAGCTAGATCCACAGAACCCGACCCCCCGCGGCTATCGCGAAGGAGAGGTGCA GGAAGACCCGTTGGAAGAGATCATCCGCAGCTTCAACGAACGTTGGTTCCAAGGCTGGAGCGCCACCCCGGAAGAACAAC GGATCAAGTTTCTGAACATCGTTGAAAGTGTTCAGGCCCACCCCGATTTCGAGAAGAAATTTGATGAAAATTCTGATCCC TACAGCCGTAACTTGGCATTTGAAAAAATTATGAAAGAAGTCATGCTAAAACGCCGGAAAGAGGAGTTGGAACTCTACAA GCTTCACAACCAGGACGAGGCGTTCAGATCTGCACTATATCTAAGCGTCAAGGAGGCGCTGACACAAAGCCTGCGCTGA Protein sequence : MDMVLFLNGLPIVTLELKNAWTHQTARYHGQKQYRERDANQTLLRFGRVLVHMTADTDEVWMATKLAGASTFFLPFNKGH NEGAGNPPNPNGHKTSYLWEEVLQPQSLAGIIQHFVLLEGKKTDPLTKKTLIFPRYHQLNVVRKLLSHAAQTGVGHKYLI QHSAGSGKSNSITWAAYQLIETYPAKLDLPGVRALDAPLFDSVIVVTDRRLLDKQLRDNIKDFSEVKNIVAPALKSSDLK AALENGKKIIITTIQKFPFIIDGIEDLGDKRFAVIIDEAHSGQSGIASDKMNQAMGGDPDEDDAQDKILAAMQARKMRGN ASYFAFTATPKPITLEKFGEQQSDGRFRPFHLYSMKQAIEEGFILDVLANYTTYKGYYEIQKSIEDNPLFDTSKAQKKLR AYVERSQQTINTKAEIMVENFIDKVVNPKKLRGKGKGMIVTQNIEVAIRYYKAVQAELAKRGNPFKALIAFSGEKEVDGV KYTETEMNGVPEDKTRSEFDKDEFRLLIVANKYLTGFDQPKLCAMYVDKKLQSVLAVQALSRLNRSSPKLGKRTEDLFVL DFFNSIEDIKAAFDPFFTVTTLSEATDVNVLHELKAALDDVGVYEWSEVEEFCKRFFDGEDSEKLSPLIDVAAERFNTGL ELEDPEKIDFKIKAKQFVKIYGQMAAIMPFEVEAWEKLFWFLKFLVPKLNIKDPNQDALDDLLKAVDLSSYGLERTKLNQ TIGLDTSEAELDPQNPTPRGYREGEVQEDPLEEIIRSFNERWFQGWSATPEEQRIKFLNIVESVQAHPDFEKKFDENSDP YSRNLAFEKIMKEVMLKRRKEELELYKLHNQDEAFRSALYLSVKEALTQSLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 71 |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 71 |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 71 |
| SAS0025 | YP_042158.1 | type I restriction enzyme protein | Not tested | SCC476 | Protein | 3e-113 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| APA01_43180 | YP_003189484.1 | type I/III endonuclease restriction R subunit | VFG1098 | Protein | 0.0 | 71 |
