Gene Information

Name : APA01_42900 (APA01_42900)
Accession : YP_003189456.1
Strain :
Genome accession: NC_013211
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 107601 - 108023 bp
Length : 423 bp
Strand : +
Note : Probably pseudogene, N-terminal domain of a gene truncated by transposon

DNA sequence :
ATGACACGCTTCATTGAGGAGCACCGGCAGACATATGGTGTCGGGTCAATCTGCAGGGTTCTGTCGATTGCACCATCTGC
CTATTATGCAACTGTTGCCAGACAGAAAAATCCGTGTGTGCGCAGCCAGAAAGACAAAGAACTGTGCGATGACATCCGTA
GAGTGTGGAATGATAATTTCTGCGTCTATGGAGCGCGCAAGGTCTGGCATCAGCTCAAACGTGAAGGCCTGGATGTCGCC
CGCTGCACGGTAGAGCGGCTGATGCGCCGGATGGGGCTGAAAGGCGTCATTCGTGGCAAGGGGGTCAGAACCACACGGCC
TGATCCGCAACGTCCGTGTCCGCAGGATCTGGTGCAGCGCCAGTTTCATGCTCCTGCCCCCAACAGACTGTGGGTTTCGG
ATTTTACTTACGTTTCCACATGA

Protein sequence :
MTRFIEEHRQTYGVGSICRVLSIAPSAYYATVARQKNPCVRSQKDKELCDDIRRVWNDNFCVYGARKVWHQLKREGLDVA
RCTVERLMRRMGLKGVIRGKGVRTTRPDPQRPCPQDLVQRQFHAPAPNRLWVSDFTYVST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3595 NP_755470.1 transposase Not tested PAI I CFT073 Protein 6e-20 51
unnamed AAT48692.1 transposase R14 Not tested PAI I 4787 Protein 4e-20 51
r14 AAC61721.1 transposase R14 Not tested PAI I CFT073 Protein 2e-19 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APA01_42900 YP_003189456.1 transposase VFG1716 Protein 2e-20 51