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Name : hsdM (APA01_41890) Accession : YP_003189355.1 Strain : Genome accession: NC_013211 Putative virulence/resistance : Unknown Product : type I DNA methyltransferase M subunit HsdM Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 4643 - 6256 bp Length : 1614 bp Strand : - Note : Restriction-modification system DNA sequence : ATGTCACGCGGTCGTCCACGTAAAAACCCTGATGCTGCCTCTGCTCCTAAGAAAACTACCAAAGCACGCAAGGCCAAGGC AGCGACCGCGACACTGGGCTTTGAACAGCAGATGTTTCTGGCGGCGGACAAGCTGCGCAAGAACCTTGAGCCTTCAGACT ACAAACATGTGGCCCTTGGCCTGATCTTCCTGCGCTACATCTCCACTGCGTTTGAAGCCCGACATGCTGAACTGATGCTG GAAGACCCGGAAGCAGCGGAAGATCCTGACGAATATCTGGCCGAGAATATCTTCTGGGTGCCGGAGACGGCTCGATGGTC TCATCTCAAGGACAATGCCCGTTCGGCCAATATTGGCAAGATGATTGATGAGGCCATGCTGGCCATCGAGAAAGCCAACC CGGAACAGCTCAAAGGCGTGCTACCCAAGGATTACGGGCGCCCGGCCCTTGATACCGTCATGCTGGGTGAGCTGATCGAC CTGATCTCCGATATCGGCATGGGCGATACGGACGACAAGGCGCGGGACGTGCTGGGCCGGGTGTATGAATACTTCCTTGG CGGGTTTGCCGGAGCCGAAGGGAAGCGTGGGGGTGAGTTCTACACGCCGTCCAGCGTGGTGCGCACGCTGGTTTCCATGC TCGAACCCTATAAGGGCCGGGTCTATGACCCCTGCTGTGGGTCTGGCGGCATGTTCGTGCAGTCCGAACGCTTTGTGGAA ACCCATGGTGGCAAGCTGGGTGATATTGCCATTTATGGGCAGGAGAGCAACCACACCACTTGGCGTCTGGCCCGTATGAA CCTTGCCGTGCGGGGTATTGGCGCGGACATTCGCTGGAACAATGAGGGCAGCTTTCTACGCGACGAGCTGAAAGACCTGC GCTTTGACTATATTCTGGCCAACCCGCCCTTTAACGTGTCGGACTGGTGGAATGCCTCGCTGGAGGAAGATCCGCGCTGG CAGTATGGCAAGCCGCCAGCGGGCAATGCCAACTATGCGTGGCTTCAGCATATTCTATGGCATCTGGCTCCCGATGGCAC CGCTGGCGTGGTGCTGGCCAATGGCTCCATGTCCTCCAACCAGAATAGCGAGGGCGAAATCCGCCGCCGGATGGTGGAAG CAGACGTGGTGGACTGCATGGTGGCCCTACCAGGACAGCTTTTCTATTCCACCCAGATTCCGGCCTGTCTGTGGTTCCTG ACCCGCACCAAGAACCCGAAAGGCTGGCGGGACCGACGCGGAGAAATCCTGTTCATTGATGCCCGCAAGCTGGGCAAGCT CGTTGACCGTACCCGCCGGGAACTGACGGATGAAGACGTAGCGCGCATTGCCGACACCTACCATGCATGGCGTGGGGAAA AGAATGCAGGGAAATACGAGGACATTCCGGGTTTCTGCAAATCCGCCACACTGGACGAGGTCGAGCAGCACGGCTTTGTG CTGACACCGGGCCGCTACGTGGGGGCAGAGGAAGCCGAGGAAGACAGTGTGCCATTTACTGAACGCTTCGCAGCCCTTGA AAAGACCCTGAAAGAGCAGTTTGCGCAGGGAGAAACCCTGAACGCGAAAATTACCGCCTCCCTGAAGCTGATCGTGCAGA AGGAAAGCGTGTGA Protein sequence : MSRGRPRKNPDAASAPKKTTKARKAKAATATLGFEQQMFLAADKLRKNLEPSDYKHVALGLIFLRYISTAFEARHAELML EDPEAAEDPDEYLAENIFWVPETARWSHLKDNARSANIGKMIDEAMLAIEKANPEQLKGVLPKDYGRPALDTVMLGELID LISDIGMGDTDDKARDVLGRVYEYFLGGFAGAEGKRGGEFYTPSSVVRTLVSMLEPYKGRVYDPCCGSGGMFVQSERFVE THGGKLGDIAIYGQESNHTTWRLARMNLAVRGIGADIRWNNEGSFLRDELKDLRFDYILANPPFNVSDWWNASLEEDPRW QYGKPPAGNANYAWLQHILWHLAPDGTAGVVLANGSMSSNQNSEGEIRRRMVEADVVDCMVALPGQLFYSTQIPACLWFL TRTKNPKGWRDRRGEILFIDARKLGKLVDRTRRELTDEDVARIADTYHAWRGEKNAGKYEDIPGFCKSATLDEVEQHGFV LTPGRYVGAEEAEEDSVPFTERFAALEKTLKEQFAQGETLNAKITASLKLIVQKESV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 7e-140 | 59 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 4e-140 | 59 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 3e-139 | 58 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-110 | 48 |
