|
Name : kdpB (APA01_40510) Accession : YP_003189217.1 Strain : Genome accession: NC_013210 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 55139 - 57247 bp Length : 2109 bp Strand : + Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGGCACTCCATTTACCTCATTCCGAAGCCCCTCATGGAGGGCGGCATTCGGAACATCGCAGTCAGAGCAGTCTGATGCA GGCGTCGCTTTTGCTGCCTGCGATCAGGGAGAGCTTCCGCAAGCTCGATCCGCGCATCATGTGGCGCAACCCGGTCATGT TTGTCGTGGAGGTCGTGACCATTCTGACGACCGTCCTGCTCATACGCGACATAGTCGCCGGGGGAACACATCTTGGCTTT GCGATCCAGATCAATCTCTGGCTCTGGTTTACACTCCTTTTCGCCAATTTCGCTGAAGCCGTCGCGGAAGGACGTGGCAA GGCGCAGGCCGACAGTCTGCGTCGCACCCGGACTGAAACACTTGGCAAGCGTCTCTTGATGAATGACGAGGGCGGCTATT CGCATCTCGGGTTGTATGAGGAAGTGCCAGCTCCCGAACTCGTAGTGGGGGACGTCGTGCTGGTTCAAGCTGGCGACTTC ATTCCAAGCGACGGCGAAGTCGTCGACGGCATTGCGTCGGTTGATGAATCTGCCATCACCGGTGAATCCGCTCCAGTAAT CCGCGAAAGCGGTGGTGATCGCTCCGCAGTGACAGGCGGCACGCGCGTCCTGTCAGACTGGGTCATTGTGAGGATTACAG CAGCCCAGGGTTCCACCTTCCTTGATCGGATGATTTCGCTTGTCGAAGGCGCACAACGCCAGAAAACGCCTAACGAGATT GCACTGACGATCCTGCTGGCGGGCATGACGCTGATCTTTATCTTCGCGGTCGCGACGATCCCGAGCTTCGTGCATTACGC GGGCGGCCATATTTCGGTTCTGATCCTCGTCGCGCTGTTCGTGACGCTGATCCCGACGACCATCGGTGCTCTGCTTTCGG CAATCGGTATCGCGGGTATGGATCGGCTGATCCGCTTCAATGTTCTCGCCATGTCGGGTCGCGCGGTAGAAGCAGCAGGG GATGTCGATACGCTGCTACTCGACAAGACTGGTACGATTACTATTGGAGACAGGCAGGCTACAGCGTTTGTTCCTGTTTC TGGCGTAACGGAACACGAACTTGCGGATGCCGCACAACTTGCATCTTTGGCTGATGAAACGCCGGAAGGGCGTTCGATCG TGGTGCTGGCCAAGGAGAAATTTGGTATCCGGGGGCGTGATATGCGTGACCTCGGTGCGCATTTTGTCCCATTTACGGCG CAAACCCGCATAAGCGGGGTAGACGTTGGGGACAGGCAGATCCGTAAGGGTGCGGTGGATAGTGTAATCGCAAGCCTCGG GGAAACCCTGCCATCTGTCGAACAGATCCGTCAGATTGCCGACGACATCGCTCGTCAGGGTGGCACGCCGCTGGCAGTCG CGGATAATACGCGCCTGCTTGGCGTAGTACATCTGAAAGACGTTGTAAAAGGAGGAATTCGCGAACGCTTTGCGGAACTA CGCCGGATGGGGATCCGGACCGTCATGATCACCGGGGATAATCCCATGACGGCCGCAGCCATCGCAGCGGAGAGCGGCGT GGACGATTTCCTGGCTCAGGCAACGCCAGAAGCGAAGCTTGCACTGATCCGTTCGGAACAGGCATCAGGCAAATTGGTGG CAATGTGCGGAGATGGTACCAACGATGCTCCAGCGCTAGCCCAGGCCGATGTTGGCGTGGCCATGAATACTGGGACTGTT GCCGCGCGTGAGGCCGGCAACATGGTTGATCTGGACAGTGATCCGACGAAACTCATTGAGATCGTGGGGATTGGTAAGCA GCTGCTCATGACGCGTGGTGCCCTGACGACGTTTTCGATCGCCAACGACGTCGCCAAATATTTCGCCATCATTCCCGCCA TGTTTGTTGGCTTCTATCCAGCACTTTCCGCGTTGAACATCATGCATCTTGCTACACCAGAAAGTGCGGTGCTCTCGGCG ATCATCTTTAACGCCCTGATTATCATCGCGCTCATTCCTCTGGCGCTGAAGGGGGTTCGTTATCGTCCGGTCGGCGCGGC ATCGCTTCTGCGGCGTAATCTTCTGGTTTACGGTATTGGCGGCCTTATCGTCCCGTTTATCGGAATCAAACTCATCGACA TGCTCGTGACGAGCATCGGTCTGGCCTGA Protein sequence : MALHLPHSEAPHGGRHSEHRSQSSLMQASLLLPAIRESFRKLDPRIMWRNPVMFVVEVVTILTTVLLIRDIVAGGTHLGF AIQINLWLWFTLLFANFAEAVAEGRGKAQADSLRRTRTETLGKRLLMNDEGGYSHLGLYEEVPAPELVVGDVVLVQAGDF IPSDGEVVDGIASVDESAITGESAPVIRESGGDRSAVTGGTRVLSDWVIVRITAAQGSTFLDRMISLVEGAQRQKTPNEI ALTILLAGMTLIFIFAVATIPSFVHYAGGHISVLILVALFVTLIPTTIGALLSAIGIAGMDRLIRFNVLAMSGRAVEAAG DVDTLLLDKTGTITIGDRQATAFVPVSGVTEHELADAAQLASLADETPEGRSIVVLAKEKFGIRGRDMRDLGAHFVPFTA QTRISGVDVGDRQIRKGAVDSVIASLGETLPSVEQIRQIADDIARQGGTPLAVADNTRLLGVVHLKDVVKGGIRERFAEL RRMGIRTVMITGDNPMTAAAIAAESGVDDFLAQATPEAKLALIRSEQASGKLVAMCGDGTNDAPALAQADVGVAMNTGTV AAREAGNMVDLDSDPTKLIEIVGIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFVGFYPALSALNIMHLATPESAVLSA IIFNALIIIALIPLALKGVRYRPVGAASLLRRNLLVYGIGGLIVPFIGIKLIDMLVTSIGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-162 | 60 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 2e-162 | 60 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-143 | 55 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 5e-142 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-142 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-142 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-142 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-142 | 55 |
