Gene Information

Name : APA01_20880 (APA01_20880)
Accession : YP_003188589.1
Strain : Acetobacter pasteurianus IFO 3283
Genome accession: NC_013209
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3588
EC number : -
Position : 2271756 - 2272061 bp
Length : 306 bp
Strand : +
Note : -

DNA sequence :
TTGAATGAGAATTTTCTCAGCGTAAGAATTGAGGAGATTCTGATGAAGAGTGATCGCTTTAGTGACGCCCAGATCATGGG
TGTGATCCGCCAGGCTGAGGGCGGTGTCCCGGTTCCTGACCTGTGCCGGGAGCATGGGATCAGCAACGCCACGTTTTACC
GGTGGCGCGCGAAATATGGCGGCATGGATGCTTCGATGATCAGTCAGATGAAGGCTTTGGAAGAGGAGAACCGTCGGCTG
AAGCGCATGTATGCGGATTTGAGCATGCAGACGGATATCCTGAAGGAAGCCCTTGGAAAAAAATGA

Protein sequence :
MNENFLSVRIEEILMKSDRFSDAQIMGVIRQAEGGVPVPDLCREHGISNATFYRWRAKYGGMDASMISQMKALEEENRRL
KRMYADLSMQTDILKEALGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-22 52
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 1e-17 50
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 5e-18 50
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 5e-18 50
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 1e-17 49
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-17 48
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 1e-17 48