Gene Information

Name : APA01_14330 (APA01_14330)
Accession : YP_003187959.1
Strain : Acetobacter pasteurianus IFO 3283
Genome accession: NC_013209
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1532213 - 1533163 bp
Length : 951 bp
Strand : +
Note : Probably pseudogene, N-terminal domain of a gene truncated by transposon

DNA sequence : 
ATGACGGGAAGCATGGATGACATAACGGCCTTACGTGCGGCACTTGCCGCCGCCGAGACGCGTGCCCGTGCTGCCGAAAC
CCGGGCCACAGACGCTGAAGCCCGAGCAGTCAGCGCTGAAGCGCAGATTACCCATCTTAAACATCTTATTGCACGGATGC
GTCAGGACCGCTTCGGGGCGTCATCGGAACGGGGACGGCGCCTGCTGGACCAGCTGGAACTTGAGCTGGAGGAGCTGGAA
ACAACGCAAGCCGAAGACGCGTTCGAAAATGCGGCGGACCTCGCTGTCTGTGCAACAGCACCGCGGAATAACCGGGGGCG
GCAGCCCTTACCCGCCGACCTGCCACGCGAACGGGTGGTTCTTCCTGCGCCAACACAGTGTCCGTGCTGTGGCGGGATGC
GCCTGAGCAAACTGGGCGAAAGTATCACTGAGACGCTGGAAGTGATCCCACGCCAGTTCAAAGTCATCCAGACGGTGCGG
GAGAAGTTCACCTGTCGGGATTGCGAGAGCATTACCCAGCCACCAGCGCCTTTCTACCCGATCTCACGGGGGCGTGCAGG
GCCAGAACTGCTGGCGGGCATTCTGTGCGACAAGTATCTCCAGCATCTGCCACTGAACAGGCAGAGTGATGCCTTTGCAC
GCGAAGGGATTGATCTCGACACGTCAACGTTAGCTGACTGGGTGGGAGCCTGCACAGCGACCCTGGCCCCTCTGAACGCG
CTGATCCGGGTCCATGTGCTGGCAGCTGGTCGTCTGCATGCGGATGACACCACCGTGCCCGTGCTGGCGAAGGGCCGAAC
ACGCACCGGTCGATTGTGGAATTATGTGCGCGACGATCACCCCTTTGGAGGTACAGCACCGCCAGCCGTGTGGTTCCGTT
ATTCACGGGACCGCAAGGGCGAACATCCTGTCGACGCGGAAATCTCACAGAAGGGTTGTACATCGGGTTAG

Protein sequence : 
MTGSMDDITALRAALAAAETRARAAETRATDAEARAVSAEAQITHLKHLIARMRQDRFGASSERGRRLLDQLELELEELE
TTQAEDAFENAADLAVCATAPRNNRGRQPLPADLPRERVVLPAPTQCPCCGGMRLSKLGESITETLEVIPRQFKVIQTVR
EKFTCRDCESITQPPAPFYPISRGRAGPELLAGILCDKYLQHLPLNRQSDAFAREGIDLDTSTLADWVGACTATLAPLNA
LIRVHVLAAGRLHADDTTVPVLAKGRTRTGRLWNYVRDDHPFGGTAPPAVWFRYSRDRKGEHPVDAEISQKGCTSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 3e-50 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APA01_14330 YP_003187959.1 transposase VFG1516 Protein 2e-50 46