Gene Information

Name : Aaci_0506 (Aaci_0506)
Accession : YP_003183952.1
Strain : Alicyclobacillus acidocaldarius DSM 446
Genome accession: NC_013205
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 560717 - 561532 bp
Length : 816 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bpt:Bpet1146 insertion sequence IS5376 putative ATP-binding protein

DNA sequence :
ATGAGCGAAGCGTTACTGGTAGCTCAGGTCGAAGAACAACTGTTGGACCTGGGCTTGAAGCGAGCTGCTGCCGTCTTGCC
GGCGTGCGTGGAGTGGGCCGCCGGGCAAGAGGCGACCTATGTCGCATTTCTCCAGCGTTTGCTGGAGGCTGAACAGGAGG
AACGGCACAGCCGGGCCATGCAGGCTCGGCTGCGCTTGGCGAACTTTCCGTTCCACAAGACGCTCGCCGACTTCGACTTC
TCGTTCCAGCCGTCTGTGGATGAGCGCCAAATCCGAGAGCTCGCAACGCTGACGTTTGTCCAAGAATGTGGAAACGTGAT
CTTCCTGGGGCCGCCGGGAGTGGGAAAGACGCATTTGGCGGTGGCCCTAGGCATGGAGGCGATTCGCCAGCGGATGAGCG
TCTACTTCGTCACGATGCAGAAGCTCGTGAGCGATTTGCGTCGAGCCTACCAAGAAGGGCGACTGGACAGGCGCCTTCGG
GTCTATACGCAGCCCAAGATTCTCATCTGCGATGAGGTCGGCTACTTGCCTCTCGACGCGCTCGACGCCGCGAACTTTTT
CCGGCTGGTATCGGAGAGGTACGAGCGAGGGTCGTTGATCATTACGTCCAACACGAGTTTCACGAACTGGGGAACGCTCT
TCGGCGATCAGGTCCTGGCCGCCGCGTTGCTCGACCGCTTGCTGCACCACGCAACGACGGTGAATATCCGCGGCAACAGT
TACCGGATGAAAGACAAGCTACGAGCTGGCGTTACGCACGCATTCTCGGGGACAAGAGACGAAGCGAACGTATGTGTGGG
GAACGAATCGCGATGA

Protein sequence :
MSEALLVAQVEEQLLDLGLKRAAAVLPACVEWAAGQEATYVAFLQRLLEAEQEERHSRAMQARLRLANFPFHKTLADFDF
SFQPSVDERQIRELATLTFVQECGNVIFLGPPGVGKTHLAVALGMEAIRQRMSVYFVTMQKLVSDLRRAYQEGRLDRRLR
VYTQPKILICDEVGYLPLDALDAANFFRLVSERYERGSLIITSNTSFTNWGTLFGDQVLAAALLDRLLHHATTVNIRGNS
YRMKDKLRAGVTHAFSGTRDEANVCVGNESR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-33 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-33 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-33 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-33 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-33 42
unnamed CAA21402.1 - Not tested HPI Protein 1e-33 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-33 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 6e-33 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-33 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-33 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-33 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aaci_0506 YP_003183952.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 6e-34 42
Aaci_0506 YP_003183952.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 6e-34 42
Aaci_0506 YP_003183952.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 6e-34 42
Aaci_0506 YP_003183952.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 4e-33 42