Gene Information

Name : Aaci_1728 (Aaci_1728)
Accession : YP_003185129.1
Strain : Alicyclobacillus acidocaldarius DSM 446
Genome accession: NC_013205
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1794725 - 1795426 bp
Length : 702 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dvm:DvMF_0882 two component transcriptional regulator, winged helix family

DNA sequence :
ATGGCACAAACGCGAATTTTGGTCGTGGACGACGAGGAACGGATTCGCCGATTGGTTCGCATGTACCTCGAGCGAAACGG
GTTTGAAGTGGACGAGGCGGCCGATGGCAAAGAAGCACTCCACAAGGCCTTGAATCAGGCGTACGCATTGATCATCCTGG
ATCTCATGTTGCCTGGGATGGACGGAAGAGACGTGTGCGCGCAAATTCGCCAGCACAGCAATGTGCCCATTATGATGCTC
ACGGCGGCGGGAGACGAGGCGAATCGCGTGCATGGGTTCGAGCTGGGAGCGGATGATTACGTGGTGAAGCCGTTCAGCCC
ACGCGAACTCGTCCTGCGCGTGAAGGCCATGCTCAAGCGCACGGGTGAAATGGAGTATGCCCGAAATGCCATTCAAACCC
TGACGTTTCCCGGCTTGGAGATTCAAATTGACGCGCGCCGTGTCGAGGTCAATGGGCAAGAAGTCAATCTGACCCCGAAA
GAGTTTGACCTTTTGGTCTATATGGCCCAACGTCCCGACAAGGTTTTCAGCCGCGAAGAGCTTCTGAGGGATGTTTGGAA
TTACCAATTCTTTGGGGATCAGCGCACCGTGGATACCCATATCAAGCGGTTGCGCGAAAAGTTAGGGCAGGCTTCTCCCG
AGGTGAGCCGCTATATCGTGACCGTCTGGGGCGTCGGGTACAAGTTCGAGGTGGCTTCGTGA

Protein sequence :
MAQTRILVVDDEERIRRLVRMYLERNGFEVDEAADGKEALHKALNQAYALIILDLMLPGMDGRDVCAQIRQHSNVPIMML
TAAGDEANRVHGFELGADDYVVKPFSPRELVLRVKAMLKRTGEMEYARNAIQTLTFPGLEIQIDARRVEVNGQEVNLTPK
EFDLLVYMAQRPDKVFSREELLRDVWNYQFFGDQRTVDTHIKRLREKLGQASPEVSRYIVTVWGVGYKFEVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-39 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 3e-45 50
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-45 50
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 3e-45 49
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 3e-45 49
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 3e-45 49
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 3e-45 49
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 3e-45 49
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 3e-45 49
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 3e-45 49
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 3e-45 49
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 8e-47 46
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 5e-43 46
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 2e-41 45
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 8e-45 44
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 1e-44 43
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator AE015929.1.gene1106. Protein 2e-36 42
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator BAC0125 Protein 5e-36 42
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator BAC0197 Protein 3e-35 42
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 9e-42 42
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_010410.6002989.p0 Protein 3e-34 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_011595.7057856.p0 Protein 3e-34 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_010400.5986590.p0 Protein 2e-33 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator AF155139.2.orf0.gene Protein 1e-42 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator AM180355.1.gene1830. Protein 3e-39 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator AF162694.1.orf4.gene Protein 3e-36 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator BAC0596 Protein 5e-34 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator CP000034.1.gene2186. Protein 3e-34 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator CP001138.1.gene2239. Protein 5e-34 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator NC_002695.1.916589.p Protein 3e-34 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator BAC0039 Protein 3e-34 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator CP000647.1.gene2531. Protein 9e-35 41
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator CP001918.1.gene3444. Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator VFG1389 Protein 1e-33 44
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator VFG1563 Protein 1e-39 42
Aaci_1728 YP_003185129.1 winged helix family two component transcriptional regulator VFG1702 Protein 8e-39 41