Gene Information

Name : Elen_2238 (Elen_2238)
Accession : YP_003182588.1
Strain : Eggerthella lenta DSM 2243
Genome accession: NC_013204
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 2630175 - 2632118 bp
Length : 1944 bp
Strand : -
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); t-RNA- binding domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mgm:Mmc1_1032 lysyl-tRNA synthetase

DNA sequence :
ATGAGCGATACCATCGACACCACCGAGCAGATCATCGAAGACGACCCCATCGCCGTGCGCCGCGCTAAGCGCGAGGCGCT
GATGGCAGCGGGCAAGGACCCGTACGGCCATGCGTTCGCGTACTCGCACCACCTGGCCGACCTGGCCGAACAGTACGCCG
ACCTCGAGGACGGCGCGTCCACCGAGGACGAGGTGAAGGTCGCCGGCCGCGTCATGGCGAAGCGCGATCAGGGCAAGCTG
GCTTTCCTCGAGCTGCGCGACTCCACGGGCGACATGCAGCTGTTCTGCCGCATCAACGCGCTGGGCGAGGACGCGTTCGC
CGAGCTCAAGGACCTGGACGTGGGCGACTGGATCGGCGTCGAGGGCACGATGATGCGCACGAAGCGCGGGCAGCTGTCCG
TGTCCGTGGCATCGTTCGAGCTGCTCAGCAAGTCGCTGCGCCCCCTGCCGGAGAAGTTCCACGGCTTGGCCGACAAGGAG
ACGCGCTATCGCCAGCGCTATGTCGACCTCGTCATGAACCGCGAGGTGCGCGACACGTTCGAGAAGCGCTTCAAGGTGGT
TTCCGCCATCCGCCGCTACATGGAGGATCACGGCTACTACGAGGTGGAGACGCCCATCCTGCACCCCATCCTCGGCGGCG
CGAACGCGCGTCCCTTCGTCACGCACCACAACGCGCTGGACAAGGACTTCTACCTGCGCATCGCCACCGAGCTGCATCTC
AAGCGCTTGCTGGTGGGCGGCTTCGAGAAGGTCTTCGAGATCGGGCGCCAGTTCCGCAACGAGGGCATGGATCCGTATCA
TAACCCCGAGTTCACCACCATGGAGTTCTACCAGGCGTTCAGCGACCTCGAAGGCATGATGGAGCTCACGCAGGGCGTCA
TCCAGGCGGCGGCGCTTGCCTCGTGCGGCACGCTGCAGGTGGAGTATCAGGGCCATCAGGTGGATCTCAGCGGATCGTGG
CGCCGCGCCACCATGATCGAGCTGGCCAGCGAAGGAGCCGGCGAGGATGTCAGCTTCCAGCGCACGCGCGACGAGCTGGT
GGATATCCTCGAGCGCAACGGCGGCCACGCCGAAGCCGCATGGGGTAAGGGCAAGCTCATCGCCGAGATCTTCGAGGCGG
TGGCCGAGGAGAAGCTCATCCAGCCCACCTTCGTCACCGAGCATCCCATCGAGGTGTCGCCGCTTGCCAAGAAGCTGGCG
GGCGATCCGAACCTGACCGAGCGCTTCGAGCTGTTCATCTGCGGCCACGAGTACGCCAACGCCTTCGGCGAGCTGAACGA
TCCGGTCGACCAGGCCGAGCGCTTCCGCGCGCAGGTGGAGGCGAAGGACCTCGGCGACGACGAGGCCATGGGCTACGACG
ACGACTACGTGCGCGCCCTCGAGTACGGCATGCCCCCGGCGGGCGGCTGCGGCATCGGCATCGACCGTCTGGTCATGCTG
CTCACCGACGCCCCGTCCATCCGCGACGTGCTGCTGTTCCCCCACATGAGGGACGAGGCTCCGGCCGGCGGGCGTCCGCG
CGCTGCCGCGCCTGCCGCTGCGGCTCCCGCAGTTGCCGAGGCGCCCATCGACTTCTCGAAGGTGGTCGTCGAGCCCCTGT
TCCAGGACGAGGTCGACTTCGACACGTTCAGCAAGTCCGATTTTCGTGCCGTGAAGGTGAAGGAGTGCGTTGCCGTTCCC
AAGAGCAAGAAGCTGCTGCAGTTCACGCTCGACGACGGCACGGGCTCCGATCGCGTCATCCTGTCCGGCATCCACGCCTA
TTACGAGCCGGAAGAGCTGGTGGGCCGCACGCTCATCGCCATCACGAACCTGCCGCCGCGCAAGATGATGGGCGTGGAAT
CGTGCGGCATGCTGCTGTCGGCCATCCATGAGGAGGAGGGCGAAGAGCGCCTGAACCTCCTGATGGTTGACGACCACATC
CCCGCCGGCGCCAAGCTGTACTAA

Protein sequence :
MSDTIDTTEQIIEDDPIAVRRAKREALMAAGKDPYGHAFAYSHHLADLAEQYADLEDGASTEDEVKVAGRVMAKRDQGKL
AFLELRDSTGDMQLFCRINALGEDAFAELKDLDVGDWIGVEGTMMRTKRGQLSVSVASFELLSKSLRPLPEKFHGLADKE
TRYRQRYVDLVMNREVRDTFEKRFKVVSAIRRYMEDHGYYEVETPILHPILGGANARPFVTHHNALDKDFYLRIATELHL
KRLLVGGFEKVFEIGRQFRNEGMDPYHNPEFTTMEFYQAFSDLEGMMELTQGVIQAAALASCGTLQVEYQGHQVDLSGSW
RRATMIELASEGAGEDVSFQRTRDELVDILERNGGHAEAAWGKGKLIAEIFEAVAEEKLIQPTFVTEHPIEVSPLAKKLA
GDPNLTERFELFICGHEYANAFGELNDPVDQAERFRAQVEAKDLGDDEAMGYDDDYVRALEYGMPPAGGCGIGIDRLVML
LTDAPSIRDVLLFPHMRDEAPAGGRPRAAAPAAAAPAVAEAPIDFSKVVVEPLFQDEVDFDTFSKSDFRAVKVKECVAVP
KSKKLLQFTLDDGTGSDRVILSGIHAYYEPEELVGRTLIAITNLPPRKMMGVESCGMLLSAIHEEEGEERLNLLMVDDHI
PAGAKLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-115 49
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 3e-90 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Elen_2238 YP_003182588.1 lysyl-tRNA synthetase VFG1668 Protein 3e-115 49